RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 VPREB1P12018 145 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 PDHA2P29803 388 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ETV5P41161 510 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 CLCN4P51793 760 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ATXN3P54252 364 aaPredicted RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 XGP55808 180 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 MGAT3Q09327 533 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 WTAPQ15007 396 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ZNF74Q16587 644 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 CELF3Q5SZQ8 465 aaKnown RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 C12orf60Q5U649 245 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 TMCO3Q6UWJ1 677 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 CDHR3Q6ZTQ4 885 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 IKBIPQ70UQ0 350 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 SLC24A5Q71RS6 500 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 CHST9Q7L1S5 443 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ADCK1Q86TW2 530 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ZNF444Q8N0Y2 327 aaPredicted RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 HDDC3Q8N4P3 179 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 PCYOX1LQ8NBM8 494 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 FAM3CQ92520 227 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 CNOT6LQ96LI5 555 aaKnown RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 C7orf26Q96N11 449 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 SPAG5Q96R06 1193 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 TAAR1Q96RJ0 339 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 PSMB7Q99436 277 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 GTPBP2Q9BX10 602 aaKnown RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 TMEM117Q9H0C3 514 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ZBP1Q9H171 429 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 HRH4Q9H3N8 390 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 KCNK15Q9H427 330 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 SERINC1Q9NRX5 453 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ANKMY1Q9P2S6 941 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 C19orf25Q9UFG5 118 aaPredicted RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 IL17BQ9UHF5 180 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 STX8Q9UNK0 236 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 TRPV2Q9Y5S1 764 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 LRRK2Q5S007 2527 aa3.04□□□□□ -1.92
CNOT2-216ENST00000548939 ASCC3Q8N3C0 2202 aaKnown RBP3.04□□□□□ -1.92
CNOT2-216ENST00000548939 MYH4Q9Y623 1939 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 FBN3Q75N90 2809 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 COL6A6A6NMZ7 2263 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CDX4O14627 284 aaPredicted RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 RRP8O43159 456 aaKnown RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 OR10H2O60403 315 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 GALR3O60755 368 aaPredicted RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 MITFO75030 526 aaPredicted RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 RPS6KA5O75582 802 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 EIF3JO75822 258 aaKnown RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 RHOBTB1O94844 696 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CCNE1P24864 410 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CSTF2P33240 577 aaKnown RBP eCLIP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 NTHL1P78549 312 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 RALBP1Q15311 655 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 SLC35D3Q5M8T2 416 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CTR9Q6PD62 1173 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 Q6ZS52 159 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 Q6ZVH6 145 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CHMP1BQ7LBR1 199 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 HAUS6Q7Z4H7 955 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 NUDT13Q86X67 352 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 FAM131BQ86XD5 332 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 ZBED8Q8IZ13 594 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 WDTC1Q8N5D0 677 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 ING5Q8WYH8 240 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CASD1Q96PB1 797 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 MRPL17Q9NRX2 175 aaKnown RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 IRAK4Q9NWZ3 460 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 TMEM161AQ9NX61 479 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 CDH7Q9ULB5 785 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 NME7Q9Y5B8 376 aa3.03□□□□□ -1.92
CNOT2-216ENST00000548939 UTP20O75691 2785 aaKnown RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
CNOT2-216ENST00000548939 GOLGA4Q13439 2230 aaKnown RBP3.03□□□□□ -1.93
CNOT2-216ENST00000548939 LAMA4Q16363 1823 aa3.03□□□□□ -1.93
CNOT2-216ENST00000548939 PCNX2A6NKB5 2137 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ATMQ13315 3056 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 FLNCQ14315 2725 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 IGSF9BQ9UPX0 1349 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 AHCTF1Q8WYP5 2266 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 A0A087WV48 116 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 BCLAF3A2AJT9 711 aaKnown RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 CDRT15L2A8MXV6 281 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 H0YAE9 185 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 PRAMEF11O60813 436 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 LRCH4O75427 683 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 AGR2O95994 175 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ADSSP30520 456 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ARL3P36405 182 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 SLC9A3P48764 834 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 DHPSP49366 369 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 SIRPAP78324 504 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 IRX4P78413 519 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 POU5F1Q01860 360 aaKnown RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ZNF415Q09FC8 603 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 UGT3A1Q6NUS8 523 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 LDB1Q86U70 411 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 TMEM173Q86WV6 379 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 KLHDC1Q8N7A1 406 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms