RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CALB2P22676 271 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 HOXD11P31277 338 aaPredicted RBP27.18■■□□□ 1.94
BRF1-213ENST00000548421 RAB38P57729 211 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 PGS1Q32NB8 556 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 VPS26BQ4G0F5 336 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 TIGD2Q4W5G0 525 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 C18orf63Q68DL7 685 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 ANKRD26P1Q6NSI1 321 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 CEACAM20Q6UY09 585 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 TMPRSS12Q86WS5 348 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 OR8J2Q8NGG1 315 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 ZNF764Q96H86 408 aaPredicted RBP27.18■■□□□ 1.94
BRF1-213ENST00000548421 WDR41Q9HAD4 459 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 SLC52A3Q9NQ40 469 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 EHD3Q9NZN3 535 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 HCN3Q9P1Z3 774 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 TMEM184BQ9Y519 407 aaPredicted RBP27.18■■□□□ 1.94
BRF1-213ENST00000548421 SEC16AO15027 2179 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 A0A1W2PP18 115 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 CFLARO15519 480 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 TBX19O60806 448 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 KCNK5O95279 499 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 JMJD7P0C870 316 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 RNH1P13489 461 aaKnown RBP27.17■■□□□ 1.94
BRF1-213ENST00000548421 TLX1P31314 330 aaPredicted RBP27.17■■□□□ 1.94
BRF1-213ENST00000548421 S100A3P33764 101 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 KIR3DL1P43629 444 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 DGKQP52824 942 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 SHC2P98077 582 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 BNIP1Q12981 228 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 STX5Q13190 355 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 TICAM1Q8IUC6 712 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 ADAMTS18Q8TE60 1221 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 VPS33AQ96AX1 596 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 CLIP3Q96DZ5 547 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 ATAD3AQ9NVI7 634 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 SH3BP4Q9P0V3 963 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 MAU2Q9Y6X3 613 aa27.17■■□□□ 1.94
BRF1-213ENST00000548421 BBIP1A8MTZ0 92 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 PLD2O14939 933 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 ANGPT2O15123 496 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 PRKRAO75569 313 aaKnown RBP27.16■■□□□ 1.94
BRF1-213ENST00000548421 T-ENOLP0DO92 83 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 OR1D4P47884 311 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 MAT1AQ00266 395 aaKnown RBP27.16■■□□□ 1.94
BRF1-213ENST00000548421 DSG2Q14126 1118 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 DCAF12Q5T6F0 453 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 C1orf189Q5VU69 101 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 DSELQ8IZU8 1212 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 WDR36Q8NI36 951 aaKnown RBP27.16■■□□□ 1.94
BRF1-213ENST00000548421 COQ8BQ96D53 544 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 CSF3RQ99062 836 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 ZNF304Q9HCX3 659 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 PRDM9Q9NQV7 894 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 PISDQ9UG56 409 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 NDUFAF1Q9Y375 327 aa27.16■■□□□ 1.94
BRF1-213ENST00000548421 CPNE3O75131 537 aaKnown RBP27.15■■□□□ 1.94
BRF1-213ENST00000548421 NTRK1P04629 796 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 LAMP1P11279 417 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 ETV5P41161 510 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 MAPK10P53779 464 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 FAM47BQ8NA70 645 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 SLC38A9Q8NBW4 561 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 PMEPA1Q969W9 287 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 GBP5Q96PP8 586 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 OR52E6Q96RD3 313 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 ZPBPQ9BS86 351 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 DUSP26Q9BV47 211 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 BHLHE41Q9C0J9 482 aaPredicted RBP27.15■■□□□ 1.94
BRF1-213ENST00000548421 CFAP54Q96N23 3096 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 SCN2AQ99250 2005 aa27.15■■□□□ 1.94
BRF1-213ENST00000548421 KNTC1P50748 2209 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 CYR61O00622 381 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 ITGAXP20702 1163 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 SDHBP21912 280 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 FBLP22087 321 aaKnown RBP27.14■■□□□ 1.94
BRF1-213ENST00000548421 MNAT1P51948 309 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 ACTN3Q08043 901 aaPredicted RBP27.14■■□□□ 1.94
BRF1-213ENST00000548421 RSPO4Q2I0M5 234 aaPredicted RBP27.14■■□□□ 1.94
BRF1-213ENST00000548421 MMEL1Q495T6 779 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 ZNF385BQ569K4 471 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 SLC48A1Q6P1K1 146 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 MSANTD1Q6ZTZ1 278 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 OR51Q1Q8NH59 317 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.14■■□□□ 1.94
BRF1-213ENST00000548421 UCN3Q969E3 161 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 COL26A1Q96A83 441 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 PEX11GQ96HA9 241 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 TAAR9Q96RI9 348 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 DDA1Q9BW61 102 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 RPF2Q9H7B2 306 aaKnown RBP27.14■■□□□ 1.94
BRF1-213ENST00000548421 MAP4K5Q9Y4K4 846 aa27.14■■□□□ 1.94
BRF1-213ENST00000548421 PTPRBP23467 1997 aa27.14■■□□□ 1.93
BRF1-213ENST00000548421 GLOD5A6NK44 160 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 CPA2P48052 419 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 ABHD18Q0P651 414 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 TARDBPQ13148 414 aaKnown RBP eCLIP27.13■■□□□ 1.93
BRF1-213ENST00000548421 SYT16Q17RD7 645 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 COQ5Q5HYK3 327 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 ARHGAP40Q5TG30 622 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms