RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ZNF542PQ5EBM4 170 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 OR7E24Q6IFN5 339 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 TRNP1Q6NT89 227 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 FAM159AQ6UWV7 190 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 RAD9BQ6WBX8 426 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CDHR3Q6ZTQ4 885 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 BNIPLQ7Z465 357 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 PRUNE1Q86TP1 453 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM139Q8IV31 216 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 FAM133AQ8N9E0 248 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 UBTD2Q8WUN7 234 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 SEPT8Q92599 483 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 PINX1Q96BK5 328 aaKnown RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 ABHD8Q96I13 439 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CNOT6LQ96LI5 555 aaKnown RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 MAP3K3Q99759 626 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CAPS2Q9BXY5 557 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 IL25Q9H293 177 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 DPEP3Q9H4B8 488 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 COG4Q9H9E3 785 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 MIS18AQ9NYP9 233 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 PTTG2Q9NZH5 202 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 KLHL8Q9P2G9 620 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 BCAP29Q9UHQ4 241 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 PSORS1C1Q9UIG5 152 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 AGO1Q9UL18 857 aaKnown RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 STUB1Q9UNE7 303 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 TMED5Q9Y3A6 229 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 COLEC10Q9Y6Z7 277 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 ABCC4O15439 1325 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 REREQ9P2R6 1566 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 TRAPPC8Q9Y2L5 1435 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 MAGI2Q86UL8 1455 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 A0A0U1RQV5 110 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ZCWPW2A0A1B0GU75 182 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 A0A1B0GUL7 405 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ANKRD61A6NGH8 418 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 FAM47DPA6NHR8 397 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 LILRA5A6NI73 299 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 C2orf81A6NN90 581 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CHEK1O14757 476 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 GPRIN2O60269 458 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 WDR1O75083 606 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CSDE1O75534 798 aaKnown RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF821O75541 412 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CIB2O75838 187 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 TFAP2AP05549 437 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 IGHV4-30-4P0DP06 118 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CLUP10909 449 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 KRT3P12035 628 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 B4GALT1P15291 398 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 DRD5P21918 477 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 DGKAP23743 735 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 PTPN4P29074 926 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 SSTR2P30874 369 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 SRD5A2P31213 254 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 AHRP35869 848 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 PTGER3P43115 390 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ATP5OP48047 213 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 NAPAP54920 295 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 VCPP55072 806 aaKnown RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ERVFC1-1P60608 527 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 HERV-K104P63124 156 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 EEF1A1P68104 462 aaKnown RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 DHX34Q14147 1143 aaKnown RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 GPAT3Q53EU6 434 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 C20orf194Q5TEA3 1177 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 EEF1A1P5Q5VTE0 462 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 C8orf82Q6P1X6 216 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 LRRC8BQ6P9F7 803 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CCBE1Q6UXH8 406 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 RUFY3Q7L099 469 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ERASQ7Z444 233 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ADGRD2Q7Z7M1 963 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC60Q8IWA6 550 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM99Q8N816 258 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 TRPV3Q8NET8 790 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 OR4C15Q8NGM1 316 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 GANCQ8TET4 914 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 PHYHIPQ92561 330 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 WBP2Q969T9 261 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 TPD52L3Q96J77 140 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 GPR137Q96N19 417 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 NDNQ99608 321 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC77Q9BR77 488 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 GANQ9H2C0 597 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 VCX2Q9H322 139 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 TLE6Q9H808 572 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF556Q9HAH1 456 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 UPF2Q9HAU5 1272 aaKnown RBP3.87□□□□□ -1.79
SCAF11-210ENST00000547654 HPS4Q9NQG7 708 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 EXOC1Q9NV70 894 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 ZDHHC2Q9UIJ5 367 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 MAB21L2Q9Y586 359 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 IL16Q14005 1332 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 KIF16BQ96L93 1317 aa3.87□□□□□ -1.79
SCAF11-210ENST00000547654 WDR81Q562E7 1941 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms