RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 HS3ST2Q9Y278 367 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 CEP350Q5VT06 3117 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 FAAHO00519 579 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 RECKO95980 971 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 DDX5P17844 614 aaKnown RBP8.36□□□□□ -1.07
TDP1-204ENST00000545686 RPL17P18621 184 aaKnown RBP8.36□□□□□ -1.07
TDP1-204ENST00000545686 CCND3P30281 292 aaPredicted RBP8.36□□□□□ -1.07
TDP1-204ENST00000545686 SOX3P41225 446 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 DOC2BQ14184 412 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 BAK1Q16611 211 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 OCLNQ16625 522 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 SYTL3Q4VX76 610 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 GPAT3Q53EU6 434 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 MPPE1Q53F39 396 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 MFSD4BQ5TF39 518 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 SLCO4C1Q6ZQN7 724 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 RFLNAQ6ZTI6 216 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 IKBIPQ70UQ0 350 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 RNF180Q86T96 592 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 TMEM150AQ86TG1 271 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
TDP1-204ENST00000545686 NOXA1Q86UR1 476 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 GPR156Q8NFN8 814 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 OR4K1Q8NGD4 311 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 OR8J1Q8NGP2 316 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 TMEM246Q9BRR3 403 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 WRAP53Q9BUR4 548 aaKnown RBP8.36□□□□□ -1.07
TDP1-204ENST00000545686 B4GALT6Q9UBX8 382 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 TMCC3Q9ULS5 477 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 KCNE2Q9Y6J6 123 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 MAU2Q9Y6X3 613 aa8.36□□□□□ -1.07
TDP1-204ENST00000545686 AP3D1O14617 1153 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 ZNF197O14709 1029 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 IMPA1P29218 277 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 DSTNP60981 165 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 POLR2LP62875 67 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 SEMG2Q02383 582 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 ZNF91Q05481 1191 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 GANABQ14697 944 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 SLC5A12Q1EHB4 618 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 SLC25A30Q5SVS4 291 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 FAM71E1Q6IPT2 247 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 ADNP2Q6IQ32 1131 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 REEP3Q6NUK4 255 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CASP12Q6UXS9 341 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 HSDL2Q6YN16 418 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CCDC149Q6ZUS6 474 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 COMMD6Q7Z4G1 85 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 LIX1LQ8IVB5 337 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 SLC34A3Q8N130 599 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 FBXO15Q8NCQ5 510 aaPredicted RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 OR7G1Q8NGA0 311 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TEFMQ96QE5 360 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 SYT17Q9BSW7 474 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 MED18Q9BUE0 208 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 EFCAB11Q9BUY7 163 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TRAF4Q9BUZ4 470 aaPredicted RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 C11orf16Q9NQ32 467 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 SNTG1Q9NSN8 517 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 GABRQQ9UN88 632 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 MYOFQ9NZM1 2061 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 H3BM21 787 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 MYL12BO14950 172 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 PDE9AO76083 593 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 POP4O95707 220 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 CYP17A1P05093 508 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CYP2A6P11509 494 aaPredicted RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 SELPP16109 830 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CPEP16870 476 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 UQCRC2P22695 453 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 HLA-DMAP28067 261 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CD70P32970 193 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 IRS1P35568 1242 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 FLT3LGP49771 235 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 ALDH6A1Q02252 535 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 DMPKQ09013 629 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 SLAMF1Q13291 335 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 CRHR2Q13324 411 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 YIF1BQ5BJH7 314 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 ZMAT1Q5H9K5 638 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 DDI2Q5TDH0 399 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TIGD3Q6B0B8 471 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 PHC2Q8IXK0 858 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TCTE3Q8IZS6 198 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TRAM1L1Q8N609 369 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 VANGL1Q8TAA9 524 aaPredicted RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 CREB3L4Q8TEY5 395 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 C16orf78Q8WTQ4 265 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 AP3S1Q92572 193 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 BHMTQ93088 406 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TMEM159Q96B96 161 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 PDXPQ96GD0 296 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 PPP1R16AQ96I34 528 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 SLC22A12Q96S37 553 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 GON7Q9BXV9 100 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 POLR2J2Q9GZM3 115 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 A4GALTQ9NPC4 353 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms