RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CPSF6Q16630 551 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SYT16Q17RD7 645 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GGTA1PQ4G0N0 100 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF766Q5HY98 468 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 DEPDC1Q5TB30 811 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 KHDRBS2Q5VWX1 349 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 HLA-DQA1Q5Y7H0 255 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 FRG2Q64ET8 278 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 OR4C11Q6IEV9 310 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ABHD17CQ6PCB6 329 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 HSDL2Q6YN16 418 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GOLGA7Q7Z5G4 137 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GPR180Q86V85 440 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 NUDT13Q86X67 352 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TMEM151BQ8IW70 566 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SRRM1Q8IYB3 904 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 KIRREL3Q8IZU9 778 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 CA13Q8N1Q1 262 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ZCCHC7Q8N3Z6 543 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 CISD2Q8N5K1 135 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GBP7Q8N8V2 638 aaPredicted RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ANKRD53Q8N9V6 530 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 L3MBTL4Q8NA19 623 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 NOA1Q8NC60 698 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 MORN4Q8NDC4 146 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 B3GNT7Q8NFL0 401 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 OR7G3Q8NG95 312 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 OR8K3Q8NH51 312 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 PRR7Q8TB68 274 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TRPC4APQ8TEL6 797 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF473Q8WTR7 871 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 FAR1Q8WVX9 515 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SNRNP40Q96DI7 357 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SMIM10Q96HG1 83 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 IMMP1LQ96LU5 166 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 DGAT2Q96PD7 388 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 FRG2BQ96QU4 278 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 MACROD1Q9BQ69 325 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TMEM79Q9BSE2 394 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 NTMT1Q9BV86 223 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 UNKQ9C0B0 810 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 NOL11Q9H8H0 719 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 BRF2Q9HAW0 419 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 TIMMDC1Q9NPL8 285 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 PNO1Q9NRX1 252 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GIMAP4Q9NUV9 329 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ADAM29Q9UKF5 820 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 FBXW2Q9UKT8 454 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GRID1Q9ULK0 1009 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 DAPP1Q9UN19 280 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 ERVK-11Q9UQG0 969 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 PLAAQ9Y263 795 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 CFL2Q9Y281 166 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC5A6Q9Y289 635 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 KLF13Q9Y2Y9 288 aaPredicted RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 YARS2Q9Y2Z4 477 aaKnown RBP5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 AKAP9Q99996 3911 aa5.26□□□□□ -1.57
CLSTN3-215ENST00000544584 GABRR3A8MPY1 467 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 A8MVJ9 347 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ACOT7O00154 380 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 COPEO14579 308 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 TAPBPO15533 448 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 GLRA3O75311 464 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC25A12O75746 678 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 BCAS2O75934 225 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MYO1DO94832 1006 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SUPT7LO94864 414 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SCELO95171 688 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MED26O95402 600 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 WDPCPO95876 746 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 TGFB1P01137 390 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 STATHP02808 62 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 PDGFAP04085 211 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ENO1P06733 434 aaKnown RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 NR2F6P10588 404 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 MYL2P10916 166 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 ITGAMP11215 1152 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 PIK3R1P27986 724 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 HMOX2P30519 316 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 GALNSP34059 522 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 DCTP40126 519 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 LIM2P55344 173 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 PKNOX1P55347 436 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 NRG3P56975 720 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 TRA2BP62995 288 aaKnown RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 HERVK_113P63132 956 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SLAMF1Q13291 335 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 E2F2Q14209 437 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC29A2Q14542 456 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 HEPACAMQ14CZ8 416 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 OR1C1Q15619 314 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 TRADDQ15628 312 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 CCNYL2Q5T2Q4 361 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 H3F3CQ6NXT2 135 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 EMBQ6PCB8 327 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 OPN5Q6U736 354 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 BNC2Q6ZN30 1099 aaPredicted RBP5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 RGS9BPQ6ZS82 235 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC29A4Q7RTT9 530 aa5.25□□□□□ -1.57
CLSTN3-215ENST00000544584 PRSS41Q7RTY9 318 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms