RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ZNF12P17014 697 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 PNLDC1Q8NA58 520 aaKnown RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 CCDC54Q8NEL0 328 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 DENND1AQ8TEH3 1009 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 SCRN2Q96FV2 425 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 RNF6Q9Y252 685 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 DOT1LQ8TEK3 1739 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 E7EQ34 232 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 CSTAP01040 98 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ADAM17P78536 824 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 EXOC3L2Q2M3D2 409 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 PAMR1Q6UXH9 720 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 C6orf120Q7Z4R8 191 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 FANK1Q8TC84 345 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ZDHHC12Q96GR4 267 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 SLC2A11Q9BYW1 496 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 UCKL1Q9NWZ5 548 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 EIF3KQ9UBQ5 218 aaKnown RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 MAFFQ9ULX9 164 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 MYH1P12882 1939 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ENTPD6O75354 484 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 MTRF1O75570 445 aaKnown RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 GATBO75879 557 aaKnown RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 SLC16A8O95907 504 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ADRB3P13945 408 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 NTSR1P30989 418 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ZXDBP98169 803 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 SLC36A4Q6YBV0 504 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ARFGAP1Q8N6T3 406 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 RETREG1Q9H6L5 497 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 WDR6Q9NNW5 1121 aaKnown RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 ADAMTS6Q9UKP5 1117 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 MUSKO15146 869 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 SDC3O75056 442 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ERVPABLB-1P60509 514 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 DEFB103AP81534 67 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 IRF5Q13568 498 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 TBC1D25Q3MII6 688 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 OSTF1Q92882 214 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 C5AR2Q9P296 337 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 C19orf25Q9UFG5 118 aaPredicted RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ZNF878C9JN71 531 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ABCB7O75027 752 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 IL1RNP18510 177 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 SOX2P48431 317 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ANKDD1AQ495B1 522 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 FBXO43Q4G163 708 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 MARCH8Q5T0T0 291 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 CES4AQ5XG92 561 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 FIGNL1Q6PIW4 674 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 ZNF782Q6ZMW2 699 aaPredicted RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 CSNK1A1LQ8N752 337 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 OR6N2Q8NGY6 317 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 TSPEARQ8WU66 669 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 DOHHQ9BU89 302 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 PCDHGA3Q9Y5H0 932 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
CHD4-211ENST00000544484 NPIPB15A6NHN6 443 aaPredicted RBP12.27□□□□□ -0.44
CHD4-211ENST00000544484 ITGA5P08648 1049 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 SIM1P81133 766 aaPredicted RBP12.27□□□□□ -0.44
CHD4-211ENST00000544484 DNASE1L3Q13609 305 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 LAMP5Q9UJQ1 280 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 SARDHQ9UL12 918 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 ST3GAL4Q11206 333 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 CYS1Q717R9 158 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 STX12Q86Y82 276 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 ZNF615Q8N8J6 731 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 SLC17A9Q9BYT1 436 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 MKS1Q9NXB0 559 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 DKKL1Q9UK85 242 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 MAU2Q9Y6X3 613 aa12.27□□□□□ -0.44
CHD4-211ENST00000544484 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 ARL6IP5O75915 188 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 LATS1O95835 1130 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.45
CHD4-211ENST00000544484 ETFAP13804 333 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 MAP2K4P45985 399 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 ZNF773Q6PK81 442 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 GNPDA2Q8TDQ7 276 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 SLC22A4Q9H015 551 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 MVB12BQ9H7P6 319 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 PDE7BQ9NP56 450 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 IL26Q9NPH9 171 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 PCTPQ9UKL6 214 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 HTR1AP08908 422 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 PFKLP17858 780 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 ATP6AP1Q15904 470 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 SLC36A3Q495N2 470 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 BBS10Q8TAM1 723 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 WDR77Q9BQA1 342 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms