RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 KCNK5O95279 499 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 SLC16A8O95907 504 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 EGFP01133 1207 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 CD6P30203 668 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 DRD3P35462 400 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 UGT2B10P36537 528 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MAP2K4P45985 399 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 PRKCDQ05655 676 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 CAMK2GQ13555 558 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 CLCA4Q14CN2 919 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 HKDC1Q2TB90 917 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 ZNF284Q2VY69 593 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 ZNF691Q5VV52 312 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 KIAA1211LQ6NV74 962 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 Q6ZPB1 254 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 EID3Q8N140 333 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 SLC44A3Q8N4M1 653 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 RASGEF1AQ8N9B8 481 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 DTD2Q96FN9 168 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 RBM4BQ9BQ04 359 aaKnown RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 RBM4Q9BWF3 364 aaKnown RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 HDAC8Q9BY41 377 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MKRN2Q9H000 416 aaKnown RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 RPRD1BQ9NQG5 326 aaKnown RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 RAD18Q9NS91 495 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 PAQR5Q9NXK6 330 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 FBXL12Q9NXK8 326 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 USE1Q9NZ43 259 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 ERVK-18Q9QC07 812 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 PCDHGA10Q9Y5H3 936 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 PIAS3Q9Y6X2 628 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MYO15AQ9UKN7 3530 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 TSPAN9O75954 239 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 SNX4O95219 450 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 ASGR2P07307 311 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 C8GP07360 202 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 C6P13671 934 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 COX7A2P14406 83 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 ALOX12P18054 663 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 POLR2CP19387 275 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 OR3A3P47888 321 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 IL5RAQ01344 420 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 CDK5R2Q13319 367 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 CYP27C1Q4G0S4 372 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 PIP5KL1Q5T9C9 394 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 THOC6Q86W42 341 aaKnown RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 CADM2Q8N3J6 435 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 AADATQ8N5Z0 425 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 OR5K1Q8NHB7 308 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 FBLIM1Q8WUP2 373 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 REXO5Q96IC2 774 aaKnown RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 DCSTAMPQ9H295 470 aa14.33□□□□□ -0.12
CHFR-223ENST00000544268 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 PNMA8BQ9ULN7 279 aaPredicted RBP14.33□□□□□ -0.12
CHFR-223ENST00000544268 CLDN24A6NM45 220 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 RECQL5O94762 991 aaPredicted RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 PSMB9P28065 219 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 RAE1P78406 368 aaKnown RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 IL18R1Q13478 541 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 GAB1Q13480 694 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 CST6Q15828 149 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 STK11Q15831 433 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 FAM46CQ5VWP2 391 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 LYPD8Q6UX82 237 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 ZNF852Q6ZMS4 543 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 ZNF438Q7Z4V0 828 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 ADHFE1Q8IWW8 467 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 ZZZ3Q8IYH5 903 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 SYTL1Q8IYJ3 562 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 NRSN1Q8IZ57 195 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 FAM109AQ8N4B1 249 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 PARP16Q8N5Y8 322 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 C1orf52Q8N6N3 182 aaKnown RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 TPD52L3Q96J77 140 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 AIFM2Q9BRQ8 373 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 ZNF717Q9BY31 904 aaPredicted RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 ITM2CQ9NQX7 267 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 PLSCR3Q9NRY6 295 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 GULP1Q9UBP9 304 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 NOSIPQ9Y314 301 aaKnown RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 GRIP1Q9Y3R0 1128 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 COL4A2P08572 1712 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 EFCAB9A8MZ26 197 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 K7ESM1 405 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 BCKDKO14874 412 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 JUPP14923 745 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 GPLD1P80108 840 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 SMAD4Q13485 552 aaKnown RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 GGTA1PQ4G0N0 100 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 TPRG1LQ5T0D9 272 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 RNF165Q6ZSG1 346 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 VN1R5Q7Z5H4 357 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 HORMAD1Q86X24 394 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 WDR20Q8TBZ3 569 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 BTN2A2Q8WVV5 523 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 RPL3LQ92901 407 aaKnown RBP14.32□□□□□ -0.12
CHFR-223ENST00000544268 TESCQ96BS2 214 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 HHIPQ96QV1 700 aa14.32□□□□□ -0.12
CHFR-223ENST00000544268 DUSP21Q9H596 190 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms