RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 F10P00742 488 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 TAC1P20366 129 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 TNFRSF8P28908 595 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 HNRNPFP52597 415 aaKnown RBP21.74■■□□□ 1.07
CHFR-222ENST00000544093 SRSF1Q07955 248 aaKnown RBP eCLIP21.74■■□□□ 1.07
CHFR-222ENST00000544093 GGTA1PQ4G0N0 100 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 ZNF766Q5HY98 468 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 TMEM52Q8NDY8 209 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 WDR20Q8TBZ3 569 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 DAZLQ92904 295 aaKnown RBP21.74■■□□□ 1.07
CHFR-222ENST00000544093 SLX1AQ9BQ83 275 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 C1QTNF3Q9BXJ4 246 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 CDCP1Q9H5V8 836 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 VTI1BQ9UEU0 232 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 RNF11Q9Y3C5 154 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 CLDN16Q9Y5I7 305 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 CLCA3PQ9Y6N3 262 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 POLEQ07864 2286 aa21.74■■□□□ 1.07
CHFR-222ENST00000544093 GABRR3A8MPY1 467 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 RTCAO00442 366 aaKnown RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 OR7A17O14581 309 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 OTCP00480 354 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 GSTA1P08263 222 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 RPS17P08708 135 aaKnown RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 CD46P15529 392 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 CPN2P22792 545 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 PPP2R1BP30154 601 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 TLX1P31314 330 aaPredicted RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 RPS13P62277 151 aaKnown RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 SLAMF1Q13291 335 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 ZRSR2Q15696 482 aaKnown RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 EIF2S3LQ2VIR3 472 aaKnown RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 AMER2Q8N7J2 671 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 TMEM178AQ8NBL3 297 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 APCDD1LQ8NCL9 501 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 MDS2Q8NDY4 140 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 OR14A16Q8NHC5 309 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 C5orf34Q96MH7 638 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 SERPINI1Q99574 410 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 NPAS2Q99743 824 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 MAPKAP1Q9BPZ7 522 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 SVILO95425 2214 aa21.73■■□□□ 1.07
CHFR-222ENST00000544093 USP9YO00507 2555 aaPredicted RBP21.73■■□□□ 1.07
CHFR-222ENST00000544093 A8MUA0 341 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 SAP18O00422 153 aaKnown RBP21.72■■□□□ 1.07
CHFR-222ENST00000544093 PLPP1O14494 284 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 SH3BGRLO75368 114 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 SEMA3DO95025 777 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 IFNA16P05015 189 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 CD96P40200 585 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 BUD31P41223 144 aaPredicted RBP21.72■■□□□ 1.07
CHFR-222ENST00000544093 OC90Q02509 493 aaPredicted RBP21.72■■□□□ 1.07
CHFR-222ENST00000544093 OR1C1Q15619 314 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 TEX35Q5T0J7 233 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 FRG2Q64ET8 278 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 CLNKQ7Z7G1 428 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 GPR180Q86V85 440 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 KIF2BQ8N4N8 673 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 OR52B6Q8NGF0 335 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 NR4A3Q92570 626 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 FRG2BQ96QU4 278 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 ALOXE3Q9BYJ1 711 aa21.72■■□□□ 1.07
CHFR-222ENST00000544093 LYARQ9NX58 379 aaKnown RBP21.72■■□□□ 1.07
CHFR-222ENST00000544093 TRBV11-1A0A0K0K1C0 115 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 A8MT66 165 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 DDAH2O95865 285 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 COX7A2P14406 83 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 CYB561P49447 251 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 MLF1P58340 268 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 HERVK_113P63132 956 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 IFT88Q13099 833 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 TRAF3Q13114 568 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 ZNF324BQ6AW86 544 aaPredicted RBP21.71■■□□□ 1.07
CHFR-222ENST00000544093 TTC19Q6DKK2 380 aaPredicted RBP21.71■■□□□ 1.07
CHFR-222ENST00000544093 MILR1Q7Z6M3 343 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 NUDT13Q86X67 352 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 TMEM151AQ8N4L1 468 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 LRRN4CLQ8ND94 238 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 MORN4Q8NDC4 146 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 MYRIPQ8NFW9 859 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 ZNF483Q8TF39 744 aaPredicted RBP21.71■■□□□ 1.07
CHFR-222ENST00000544093 SSC4DQ8WTU2 575 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 TANKQ92844 425 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 SCMH1Q96GD3 660 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 TAAR6Q96RI8 345 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 ERVK-6Q9BXR3 956 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 EPB41L4BQ9H329 900 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 DDX31Q9H8H2 851 aaKnown RBP21.71■■□□□ 1.07
CHFR-222ENST00000544093 TRIM45Q9H8W5 580 aaPredicted RBP21.71■■□□□ 1.07
CHFR-222ENST00000544093 ZBTB26Q9HCK0 441 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 AHSPQ9NZD4 102 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 LRFN1Q9P244 771 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 FBXW2Q9UKT8 454 aa21.71■■□□□ 1.07
CHFR-222ENST00000544093 SPTAN1Q13813 2472 aaKnown RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 TGFBR3LH3BV60 316 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 ZFAND5O76080 213 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 TPP2P29144 1249 aaPredicted RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 TRHRP34981 398 aaPredicted RBP21.7■■□□□ 1.06
CHFR-222ENST00000544093 TNFRSF17Q02223 184 aa21.7■■□□□ 1.06
CHFR-222ENST00000544093 CYP20A1Q6UW02 462 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms