RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 APOBEC4Q8WW27 367 aaKnown RBP3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SLC13A3Q8WWT9 602 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 GGHQ92820 318 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 NTMT1Q9BV86 223 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 ABCG8Q9H221 673 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 DPEP2Q9H4A9 486 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 ATP13A3Q9H7F0 1226 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 RPF1Q9H9Y2 349 aaKnown RBP3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SYTL2Q9HCH5 934 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCFD1-207ENST00000544052 NARFQ9UHQ1 456 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 USP16Q9Y5T5 823 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SPEF2Q9C093 1822 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 TRPM7Q96QT4 1865 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 TMEM129A0AVI4 362 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 CCDC162PA2VCL2 907 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 GLTPD2A6NH11 291 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 FGF17O60258 216 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 TRMUO75648 421 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 CALCAP01258 141 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SERPINB2P05120 415 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 YES1P07947 543 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 FAM157CP0CG43 387 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 AHCYP23526 432 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ELAVL4P26378 380 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 RBMS1P29558 406 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PPP2R1AP30153 589 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PRKAR2BP31323 418 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 DLX5P56178 289 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 BTG1P62324 171 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 RPP38P78345 283 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 LCP2Q13094 533 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 TRA2AQ13595 282 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 STXBP2Q15833 593 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 KIAA1644Q3SXP7 199 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PRR5LQ6MZQ0 368 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF790Q6PG37 636 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ISLR2Q6UXK2 745 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SH2D5Q6ZV89 423 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 COX8CQ7Z4L0 72 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF524Q96C55 264 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 C10orf90Q96M02 699 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 FSD1Q9BTV5 496 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PPANQ9NQ55 473 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ZCCHC3Q9NUD5 404 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PANK4Q9NVE7 773 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 TBC1D13Q9NVG8 400 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 NDUFA13Q9P0J0 144 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 HMG20BQ9P0W2 317 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 TRMT6Q9UJA5 497 aaKnown RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 FOXA2Q9Y261 457 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 STK36Q9NRP7 1315 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ABCC12Q96J65 1359 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SCN9AQ15858 1988 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PSME4Q14997 1843 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 A0A1B0GUL6 1792 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 THSD7BQ9C0I4 1608 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 DUOX1Q9NRD9 1551 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SLC9B1P1A6NJY1 282 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SMIM1B2RUZ4 78 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 BMPR1BO00238 502 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 GMNNO75496 209 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 STBD1O95210 358 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 CAVIN2O95810 425 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 RAF1P04049 648 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 EDN1P05305 212 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 MAGEA11P43364 429 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 OR1D5P58170 312 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 GK2Q14410 553 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 GTDC1Q4AE62 458 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PDLIM3Q53GG5 364 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SLC25A47Q6Q0C1 308 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 OLFM4Q6UX06 510 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 MCM10Q7L590 875 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ADAMTSL2Q86TH1 951 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 TCEANCQ8N8B7 351 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 CCNYQ8ND76 341 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 OR10V1Q8NGI7 309 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 EXOC6Q8TAG9 804 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SEPT8Q92599 483 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PRCCQ92733 491 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 TBC1D31Q96DN5 1066 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 LMLNQ96KR4 655 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 NECTIN4Q96NY8 510 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PLEKHF1Q96S99 279 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 NACAP1Q9BZK3 213 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 NAPBQ9H115 298 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 MMP28Q9H239 520 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 CARD9Q9H257 536 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF334Q9HCZ1 680 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 SLC52A3Q9NQ40 469 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 FAM212BQ9NTI7 297 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-207ENST00000544052 IL36AQ9UHA7 158 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 MAN1B1Q9UKM7 699 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 PRDM4Q9UKN5 801 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 POMT2Q9UKY4 750 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 GRID1Q9ULK0 1009 aa3.29□□□□□ -1.88
SCFD1-207ENST00000544052 C2orf92A0A1B0GVN3 265 aa3.28□□□□□ -1.88
SCFD1-207ENST00000544052 KRTAP29-1A8MX34 341 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms