RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EFNA3P52797 238 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 MAPK12P53778 367 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 TNFRSF17Q02223 184 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 SSPNQ14714 243 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 UGT8Q16880 541 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 GALNTL6Q49A17 601 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 ATP1A1-AS1Q5TC04 95 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 FAAH2Q6GMR7 532 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 GALNT18Q6P9A2 607 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 RGS9BPQ6ZS82 235 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 RAB43Q86YS6 212 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 ADAMTS17Q8TE56 1095 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 C11orf24Q96F05 449 aaPredicted RBP12.83□□□□□ -0.36
SP140-213ENST00000543928 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 EBPLQ9BY08 206 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 NUF2Q9BZD4 464 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 SEMA3GQ9NS98 782 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 RIC8BQ9NVN3 520 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 SIRT5Q9NXA8 310 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 GIMAP2Q9UG22 337 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 MRPS33Q9Y291 106 aaKnown RBP12.83□□□□□ -0.36
SP140-213ENST00000543928 ATG4BQ9Y4P1 393 aa12.83□□□□□ -0.36
SP140-213ENST00000543928 POLR3HQ9Y535 204 aaPredicted RBP12.83□□□□□ -0.36
SP140-213ENST00000543928 A0A1W2PR48 441 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 K7ENP7 123 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PROM1O43490 865 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PRMT3O60678 531 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PEX11AO75192 247 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 ALOX12BO75342 701 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 MYO1DO94832 1006 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 IGHEP01854 428 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 FURINP09958 794 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 MMP11P24347 488 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 RPL38P63173 70 aaKnown RBP12.82□□□□□ -0.36
SP140-213ENST00000543928 BTG2P78543 158 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 RHAGQ02094 409 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 GUCY1A3Q02108 690 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 CDC20Q12834 499 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 KIAA0040Q15053 153 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 ST3GAL2Q16842 350 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 C18orf63Q68DL7 685 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 INO80CQ6PI98 192 aaPredicted RBP12.82□□□□□ -0.36
SP140-213ENST00000543928 FAM47EQ6ZV65 393 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 MED25Q71SY5 747 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PPP1R32Q7Z5V6 425 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 ZNF595Q8IYB9 648 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PIWIL2Q8TC59 973 aaKnown RBP12.82□□□□□ -0.36
SP140-213ENST00000543928 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 METTL2AQ96IZ6 378 aaKnown RBP12.82□□□□□ -0.36
SP140-213ENST00000543928 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 PRTFDC1Q9NRG1 225 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 TEX10Q9NXF1 929 aaPredicted RBP12.82□□□□□ -0.36
SP140-213ENST00000543928 LAMA5O15230 3695 aa12.82□□□□□ -0.36
SP140-213ENST00000543928 TCP11X1B4DZS4 312 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 SLCO1B7G3V0H7 640 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 CLDN4O14493 209 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 HDAC3O15379 428 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 GUCY1B2O75343 617 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 PRKRAO75569 313 aaKnown RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 AIFM1O95831 613 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 CYC1P08574 325 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 ANXA4P09525 319 aaPredicted RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 C8orf89P0DMQ9 161 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 NR2F6P10588 404 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 MAOAP21397 527 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 TLX1P31314 330 aaPredicted RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 BUD31P41223 144 aaPredicted RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 HK2P52789 917 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 HSD17B7P56937 341 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 TRA2BP62995 288 aaKnown RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 CXADRP78310 365 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 SLC13A2Q13183 592 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 ATP6AP1LQ52LC2 224 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 RFTN2Q52LD8 501 aaPredicted RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 CRTC2Q53ET0 693 aaPredicted RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 C6orf136Q5SQH8 315 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 NOXRED1Q6NXP6 359 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 QSOX2Q6ZRP7 698 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 MRGPREQ86SM8 312 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 WDR75Q8IWA0 830 aaKnown RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 PLPP5Q8NEB5 264 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 C16orf78Q8WTQ4 265 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 METTL21AQ8WXB1 218 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 TSLPQ969D9 159 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 TM4SF18Q96CE8 201 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 MESP1Q9BRJ9 268 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 RPF2Q9H7B2 306 aaKnown RBP12.81□□□□□ -0.36
SP140-213ENST00000543928 WDR41Q9HAD4 459 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 MEAF6Q9HAF1 191 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 VTI1BQ9UEU0 232 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 DLGAP4Q9Y2H0 992 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 MMACHCQ9Y4U1 282 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 HS3ST3B1Q9Y662 390 aa12.81□□□□□ -0.36
SP140-213ENST00000543928 IGKV3D-11A0A0A0MRZ8 115 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms