RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	SYT16	Q17RD7	645 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	DPY19L1	Q2PZI1	675 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	MLIP	Q5VWP3	458 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	OR52E8	Q6IFG1	317 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	MRM1	Q6IN84	353 aa	Known RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	NLGN4X	Q8N0W4	816 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	DTWD1	Q8N5C7	304 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	FKBP10	Q96AY3	582 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	TBC1D20	Q96BZ9	403 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	MIEF2	Q96C03	454 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	PPCDC	Q96CD2	204 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	TM4SF18	Q96CE8	201 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	C11orf24	Q96F05	449 aa	Predicted RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	SLC46A1	Q96NT5	459 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	LRRC37B	Q96QE4	947 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	OR1F2P	Q96R84	312 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	RPF2	Q9H7B2	306 aa	Known RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	WDR70	Q9NW82	654 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	TEX10	Q9NXF1	929 aa	Predicted RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	FOXJ2	Q9P0K8	574 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	NXT1	Q9UKK6	140 aa	Known RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	PADI1	Q9ULC6	663 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	ENTPD4	Q9Y227	616 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	PADI2	Q9Y2J8	665 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	ASB4	Q9Y574	426 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	PCDHGA7	Q9Y5G6	932 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	GPR45	Q9Y5Y3	372 aa		11.23	□□□□□ -0.61
DDB1-223	ENST00000543658	DMXL1	Q9Y485	3027 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658		A0A1W2PNU3	283 aa	Predicted RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	FCHO1	O14526	889 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	SCAMP2	O15127	329 aa	Known RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	PROM1	O43490	865 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	ERAL1	O75616	437 aa	Known RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	DLGAP3	O95886	979 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	FH	P07954	510 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	ITGAX	P20702	1163 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	DDC	P20711	480 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	TACR1	P25103	407 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	PIK3R1	P27986	724 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	ADSL	P30566	484 aa	Predicted RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	NTS	P30990	170 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	SNRPN	P63162	240 aa	Known RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	PGS1	Q32NB8	556 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	MINDY4	Q4G0A6	757 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	AGK	Q53H12	422 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	FAM71E1	Q6IPT2	247 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	IGF2-AS	Q6U949	168 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	MTDH	Q86UE4	582 aa	Known RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	ZNF595	Q8IYB9	648 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	SLC38A9	Q8NBW4	561 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	C7orf57	Q8NEG2	295 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	KLHL29	Q96CT2	875 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	MTERF3	Q96E29	417 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	EGLN2	Q96KS0	407 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	CSF3R	Q99062	836 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	SCNM1	Q9BWG6	230 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	NMUR2	Q9GZQ4	415 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	REEP4	Q9H6H4	257 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	PRDM9	Q9NQV7	894 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	PRTFDC1	Q9NRG1	225 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	CCDC167	Q9P0B6	97 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	SH3BP4	Q9P0V3	963 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	UTS2R	Q9UKP6	389 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	KLK13	Q9UKR3	277 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	ATG4B	Q9Y4P1	393 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	PCDHA9	Q9Y5H5	950 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	ZNF780B	Q9Y6R6	833 aa		11.22	□□□□□ -0.61
DDB1-223	ENST00000543658	TEX51	A0A1B0GUA7	166 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658		A0A1W2PR48	441 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	SYNDIG1L	A6NDD5	238 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	NR5A2	O00482	541 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	SLC22A2	O15244	555 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	BRINP1	O60477	761 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	RAD1	O60671	282 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	B4GALT2	O60909	372 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	CDC123	O75794	336 aa	Predicted RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	ALB	P02768	609 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	FURIN	P09958	794 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	MRPL19	P49406	292 aa	Known RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	POLR2J	P52435	117 aa	Known RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	UFM1	P61960	85 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	RPS15	P62841	145 aa	Known RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	SRSF11	Q05519	484 aa	Known RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	STX4	Q12846	297 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	SLC13A2	Q13183	592 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	UBAP2L	Q14157	1087 aa	Known RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	RTP5	Q14D33	572 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	CPTP	Q5TA50	214 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	C6orf163	Q5TEZ5	329 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	ZNF385C	Q66K41	422 aa	Predicted RBP	11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	C18orf63	Q68DL7	685 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	PAOX	Q6QHF9	649 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	OVCH1	Q7RTY7	1134 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	TICAM1	Q8IUC6	712 aa		11.21	□□□□□ -0.61
DDB1-223	ENST00000543658	PRSS58	Q8IYP2	241 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms