RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 STX16-NPEPL1H3BU86 382 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CYR61O00622 381 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 E2F3O00716 465 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CDK2AP1O14519 115 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 STX16O14662 325 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PRAMEF2O60811 474 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SH3BGRLO75368 114 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SIX3O95343 332 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLDN9O95484 217 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 F10P00742 488 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CERS1P27544 350 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GCAP28676 217 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 EEF1DP29692 281 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SRSF1Q07955 248 aaKnown RBP eCLIP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MRPL49Q13405 166 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ELOAQ14241 798 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SLC29A2Q14542 456 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NR6A1Q15406 480 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 EIF2S3LQ2VIR3 472 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 BEND6Q5SZJ8 279 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 KHDRBS2Q5VWX1 349 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FCRLBQ6BAA4 426 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR4C11Q6IEV9 310 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GOLGA7Q7Z5G4 137 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RPS19BP1Q86WX3 136 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MYLK4Q86YV6 388 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CRLF3Q8IUI8 442 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SLC5A8Q8N695 610 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ACOT4Q8N9L9 421 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 L3MBTL4Q8NA19 623 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 C7orf57Q8NEG2 295 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NFAM1Q8NET5 270 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 HUS1BQ8NHY5 278 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GRHL3Q8TE85 626 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAR1Q8WVX9 515 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PHF21BQ96EK2 531 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CENPKQ9BS16 269 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TXLNGYQ9BZA5 131 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR51B5Q9H339 312 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CDCP1Q9H5V8 836 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NOL11Q9H8H0 719 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RNF11Q9Y3C5 154 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SPACA6W5XKT8 324 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NINQ8N4C6 2090 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PCNX1Q96RV3 2341 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 IQANK1A0A1B0GTG1 560 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 BLACEA4D250 179 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ANKUB1A6NFN9 424 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FOXE1O00358 373 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SAP18O00422 153 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RTCAO00442 366 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR7A17O14581 309 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 HIST1H1TP22492 207 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CD96P40200 585 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CCNG1P51959 295 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 HNRNPFP52597 415 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ARFIP1P53367 373 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RPS13P62277 151 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PHEXP78562 749 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 STX4Q12846 297 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SLAMF1Q13291 335 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 BIKQ13323 160 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DDX39BQ13838 428 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CPSF6Q16630 551 aaKnown RBP eCLIP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF793Q6ZN11 406 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SCUBE1Q8IWY4 988 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LGI4Q8N135 537 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 BEST3Q8N1M1 668 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TMEM132CQ8N3T6 1108 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RNF175Q8N4F7 328 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MREGQ8N565 214 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 BCORP1Q8N888 145 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAM47BQ8NA70 645 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ST6GALNAC3Q8NDV1 305 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TMEM52Q8NDY8 209 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DNAJB8Q8NHS0 232 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MTERF1Q99551 399 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NPAS2Q99743 824 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MAPKAP1Q9BPZ7 522 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 UTP23Q9BRU9 249 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NTMT1Q9BV86 223 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ALOXE3Q9BYJ1 711 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DEFB126Q9BYW3 111 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MRPL46Q9H2W6 279 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PNO1Q9NRX1 252 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 XPR1Q9UBH6 696 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 VTI1BQ9UEU0 232 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FETUBQ9UGM5 382 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PPIEQ9UNP9 301 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PCDHGB6Q9Y5F9 930 aa9.1□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LCE2BO14633 110 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MAN1A2O60476 641 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MYO1DO94832 1006 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 AGFG2O95081 481 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SCELO95171 688 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RASAL1O95294 804 aa9.09□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CRYABP02511 175 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms