RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TACR1P25103 407 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 KLC1Q07866 573 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 TBC1D25Q3MII6 688 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 NDUFAF5Q5TEU4 345 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 GKAP1Q5VSY0 366 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-205ENST00000542541 TMEM198Q66K66 360 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 LCN10Q6JVE6 187 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 MED25Q71SY5 747 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.8■■□□□ 1.08
HOMER3-205ENST00000542541 MIEF2Q96C03 454 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 WDR54Q9H977 334 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 PRDM9Q9NQV7 894 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 MRGBPQ9NV56 204 aa21.8■■□□□ 1.08
HOMER3-205ENST00000542541 WDFY3Q8IZQ1 3526 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 AKAP13Q12802 2813 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 C1orf226A1L170 272 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 CYR61O00622 381 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 BMP10O95393 424 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 IL3P08700 152 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 NR2F6P10588 404 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 TCN2P20062 427 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 STX1BP61266 288 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 C2orf80Q0P641 193 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 MRPL14Q6P1L8 145 aaKnown RBP21.79■■□□□ 1.08
HOMER3-205ENST00000542541 DTX1Q86Y01 620 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 ZNF595Q8IYB9 648 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 STT3BQ8TCJ2 826 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 RPF2Q9H7B2 306 aaKnown RBP21.79■■□□□ 1.08
HOMER3-205ENST00000542541 TEX10Q9NXF1 929 aaPredicted RBP21.79■■□□□ 1.08
HOMER3-205ENST00000542541 CTSFQ9UBX1 484 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 ANGPTL2Q9UKU9 493 aa21.79■■□□□ 1.08
HOMER3-205ENST00000542541 RAB40ALP0C0E4 278 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 LIPCP11150 499 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 NCF2P19878 526 aaPredicted RBP21.78■■□□□ 1.08
HOMER3-205ENST00000542541 RPL3P39023 403 aaKnown RBP21.78■■□□□ 1.08
HOMER3-205ENST00000542541 STAT5AP42229 794 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 CLDN8P56748 225 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 NCF4Q15080 339 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 NKG7Q16617 165 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 VWA2Q5GFL6 755 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 FAM71E1Q6IPT2 247 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 FAM198BQ6UWH4 519 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 IL22RA1Q8N6P7 574 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 FAM47BQ8NA70 645 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 STARD8Q92502 1023 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 TANKQ92844 425 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 NKD1Q969G9 470 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 EGLN2Q96KS0 407 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 BRINP2Q9C0B6 783 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 PSME2Q9UL46 239 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 G3BP2Q9UN86 482 aaKnown RBP21.78■■□□□ 1.08
HOMER3-205ENST00000542541 PADI2Q9Y2J8 665 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 PCDHA9Q9Y5H5 950 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 GPR45Q9Y5Y3 372 aa21.78■■□□□ 1.08
HOMER3-205ENST00000542541 VSTM2BA6NLU5 285 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 C21orf140B9A014 251 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 FAM227AF5H4B4 570 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 PRMT3O60678 531 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 AIFM1O95831 613 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 ZGLP1P0C6A0 271 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 DDX5P17844 614 aaKnown RBP21.77■■□□□ 1.08
HOMER3-205ENST00000542541 PRPS1L1P21108 318 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 RPS15P62841 145 aaKnown RBP21.77■■□□□ 1.08
HOMER3-205ENST00000542541 PTGR1Q14914 329 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 C18orf63Q68DL7 685 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 R3HCC1LQ7Z5L2 792 aaKnown RBP21.77■■□□□ 1.08
HOMER3-205ENST00000542541 CLNKQ7Z7G1 428 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 ZC3H7AQ8IWR0 971 aaKnown RBP21.77■■□□□ 1.08
HOMER3-205ENST00000542541 CT55Q8WUE5 264 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 CATSPER2Q96P56 530 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 CSF3RQ99062 836 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 GPR87Q9BY21 358 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 DPY30Q9C005 99 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 MIEF1Q9NQG6 463 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 SDR39U1Q9NRG7 319 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-205ENST00000542541 EHD3Q9NZN3 535 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 ARL2BPQ9Y2Y0 163 aa21.77■■□□□ 1.08
HOMER3-205ENST00000542541 B4GALT2O60909 372 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 DDCP20711 480 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 PPP2R1BP30154 601 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 HSD17B7P56937 341 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 PDCD4Q53EL6 469 aaKnown RBP21.77■■□□□ 1.07
HOMER3-205ENST00000542541 OR52E8Q6IFG1 317 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 ERMP1Q7Z2K6 904 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 MIER2Q8N344 545 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 C7orf57Q8NEG2 295 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 CLHC1Q8NHS4 586 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 BCAS4Q8TDM0 211 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 FGF11Q92914 225 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 MTERF3Q96E29 417 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 PRPF18Q99633 342 aaKnown RBP21.77■■□□□ 1.07
HOMER3-205ENST00000542541 HEY2Q9UBP5 337 aa21.77■■□□□ 1.07
HOMER3-205ENST00000542541 NDUFAB1O14561 156 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 HPCAL1P37235 193 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 ALDH9A1P49189 494 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 ATP4BP51164 291 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 ACTN3Q08043 901 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-205ENST00000542541 ERV3-1Q14264 604 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 MINDY4Q4G0A6 757 aa21.76■■□□□ 1.07
HOMER3-205ENST00000542541 MFSD4BQ5TF39 518 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms