RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 AHCTF1Q8WYP5 2266 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 FREM2Q5SZK8 3169 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 CFAP47Q6ZTR5 3102 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 BLACEA4D250 179 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 FAM227AF5H4B4 570 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 RRP8O43159 456 aaKnown RBP16.14■□□□□ 0.17
LIG1-204ENST00000542460 KLK10O43240 276 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 DIAPH2O60879 1101 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 JRKO75564 520 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 LIFP15018 202 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 LBPP18428 481 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 FOLR3P41439 243 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 AQP5P55064 265 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 ZNF763Q0D2J5 394 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 SLC9B1Q4ZJI4 515 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 ZNF595Q8IYB9 648 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 PRSS58Q8IYP2 241 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 FAM47BQ8NA70 645 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 ACTRT2Q8TDY3 377 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 ZCCHC14Q8WYQ9 949 aaKnown RBP16.14■□□□□ 0.17
LIG1-204ENST00000542460 CHMP6Q96FZ7 201 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 RBCK1Q9BYM8 510 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 ACTL8Q9H568 366 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 SOX17Q9H6I2 414 aaPredicted RBP16.14■□□□□ 0.17
LIG1-204ENST00000542460 LANCL2Q9NS86 450 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 MKL2Q9ULH7 1088 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 EIF3LQ9Y262 564 aaKnown RBP16.14■□□□□ 0.17
LIG1-204ENST00000542460 DLGAP4Q9Y2H0 992 aa16.14■□□□□ 0.17
LIG1-204ENST00000542460 SCN3AQ9NY46 2000 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 GOLGA8QA0A0J9YX86 632 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 A0A1W2PR48 441 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 GOLGA8OA6NCC3 632 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 GOLGA8NF8WBI6 632 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 CLDN4O14493 209 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 B4GALT2O60909 372 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 TROVE2P10155 538 aaKnown RBP eCLIP16.13■□□□□ 0.17
LIG1-204ENST00000542460 LSP1P33241 339 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 TAS2R50P59544 299 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 ERVK-8P63133 956 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 TNFRSF17Q02223 184 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 MINDY4Q4G0A6 757 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 NDUFAF5Q5TEU4 345 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 MFSD4BQ5TF39 518 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 SHISA6Q6ZSJ9 500 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 VASH2Q86V25 355 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 LAPTM4BQ86VI4 370 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 CEP70Q8NHQ1 597 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 C16orf78Q8WTQ4 265 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 CSF3RQ99062 836 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 RPF2Q9H7B2 306 aaKnown RBP16.13■□□□□ 0.17
LIG1-204ENST00000542460 WDR41Q9HAD4 459 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 NPHS2Q9NP85 383 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 TEX10Q9NXF1 929 aaPredicted RBP16.13■□□□□ 0.17
LIG1-204ENST00000542460 IL17BQ9UHF5 180 aa16.13■□□□□ 0.17
LIG1-204ENST00000542460 IDSB3KWA1 339 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
LIG1-204ENST00000542460 CDC123O75794 336 aaPredicted RBP16.12■□□□□ 0.17
LIG1-204ENST00000542460 HEXBP07686 556 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 CYC1P08574 325 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 NR2F6P10588 404 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 PRPS2P11908 318 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 BCKDHAP12694 445 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 IDH3AP50213 366 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 HSD17B7P56937 341 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 FOXL2P58012 376 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 RPS18P62269 152 aaKnown RBP16.12■□□□□ 0.17
LIG1-204ENST00000542460 GNGT1P63211 74 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 HEPACAMQ14CZ8 416 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 IL23RQ5VWK5 629 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 C18orf63Q68DL7 685 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 NXNQ6DKJ4 435 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 OGFOD2Q6N063 350 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 ACAD11Q709F0 780 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 PROSER1Q86XN7 944 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 TMEM132CQ8N3T6 1108 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.12■□□□□ 0.17
LIG1-204ENST00000542460 TANKQ92844 425 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 THOC1Q96FV9 657 aaKnown RBP16.12■□□□□ 0.17
LIG1-204ENST00000542460 SLC45A3Q96JT2 553 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 CCNL2Q96S94 520 aaPredicted RBP16.12■□□□□ 0.17
LIG1-204ENST00000542460 CRB3Q9BUF7 120 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 C1orf50Q9BV19 199 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 FAIM2Q9BWQ8 316 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 VN1R1Q9GZP7 353 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 MYNNQ9NPC7 610 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 PRDM9Q9NQV7 894 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 ASIC5Q9NY37 505 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 NOP53Q9NZM5 478 aaKnown RBP16.12■□□□□ 0.17
LIG1-204ENST00000542460 C3orf18Q9UK00 162 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 SSUH2Q9Y2M2 353 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 MMACHCQ9Y4U1 282 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 ZZEF1O43149 2961 aa16.12■□□□□ 0.17
LIG1-204ENST00000542460 C1orf226A1L170 272 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 PRMT3O60678 531 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 CREG1O75629 220 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 AIFM1O95831 613 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 RECKO95980 971 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 UMODP07911 640 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 IL3P08700 152 aa16.11■□□□□ 0.17
LIG1-204ENST00000542460 SDC1P18827 310 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms