RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 NUAK2Q9H093 628 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 DCSTAMPQ9H295 470 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 SLC6A15Q9H2J7 730 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 TM9SF3Q9HD45 589 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 GSN-AS1Q9NRJ2 163 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 THUMPD1Q9NXG2 353 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PLCL2Q9UPR0 1127 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 MUC22E2RYF6 1773 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 KIF26AQ9ULI4 1882 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 UBA6A0AVT1 1052 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 NPIPB15A6NHN6 443 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 AGAP5A6NIR3 686 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 HSBP1L1C9JCN9 74 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 G3V2T6 193 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 EIF1BO60739 113 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ALPLP05186 524 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PGRP06401 933 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CA3P07451 260 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 RAB3AP20336 220 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 DDCP20711 480 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 IMPDH1P20839 514 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PCMT1P22061 227 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CBLP22681 906 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 UQCRC1P31930 480 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 EIF1P41567 113 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 GCGRP47871 477 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CACNG1Q06432 222 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ALKBH1Q13686 389 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PTPRNQ16849 979 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 SYT16Q17RD7 645 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 SGO1Q5FBB7 561 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 LY6G5CQ5SRR4 150 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF678Q5SXM1 525 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 TPRG1LQ5T0D9 272 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 IRAK1BP1Q5VVH5 260 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 GLYATQ6IB77 296 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 KIAA1324Q6UXG2 1013 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 PARP16Q8N5Y8 322 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ITFG1Q8TB96 612 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CD200R1Q8TD46 325 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 DTD1Q8TEA8 209 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CCDC126Q96EE4 140 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 MRGPRX3Q96LB0 322 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 FOPNLQ96NB1 174 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 NECTIN4Q96NY8 510 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 MCCC1Q96RQ3 725 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 GPR21Q99679 349 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CPEB1Q9BZB8 566 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 CD274Q9NZQ7 290 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 ATXN7L1Q9ULK2 861 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 BTBD3Q9Y2F9 522 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 KCNE2Q9Y6J6 123 aa7.66□□□□□ -1.18
PDLIM5-221ENST00000542407 TTLL8A6PVC2 850 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 WRBO00258 174 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 LDLRAD4O15165 306 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 NDUFS3O75489 264 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 RHOBTB1O94844 696 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 CLDN7O95471 211 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 ALDOCP09972 364 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 HSD17B1P14061 328 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 PKMP14618 531 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 CD36P16671 472 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 BPIP17213 487 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 PTBP1P26599 531 aaKnown RBP eCLIP7.65□□□□□ -1.189e-7■■■■□ 21.6
PDLIM5-221ENST00000542407 MAPK9P45984 424 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 PRIM2P49643 509 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 TPMTP51580 245 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 CLCN7P51798 805 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 HNRNPKP61978 463 aaKnown RBP eCLIP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 ABATP80404 500 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 KCNC3Q14003 757 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 GALEQ14376 348 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 UNC50Q53HI1 259 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 ZRANB3Q5FWF4 1079 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 WDR73Q6P4I2 378 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 SPESP1Q6UW49 350 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 CYHR1Q6ZMK1 362 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 TSPAN33Q86UF1 283 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 HORMAD1Q86X24 394 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 CYP4Z2PQ8N1L4 340 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 KDF1Q8NAX2 398 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 GLB1L3Q8NCI6 653 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 VN1R2Q8NFZ6 395 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 MYLIPQ8WY64 445 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 ING5Q8WYH8 240 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 GTF2H4Q92759 462 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 KCNJ9Q92806 393 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 EXT2Q93063 718 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 KIAA1191Q96A73 305 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 C3orf30Q96M34 536 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 ZNF285Q96NJ3 590 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 FYTTD1Q96QD9 318 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 AMBRA1Q9C0C7 1298 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 EML4Q9HC35 981 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 IL26Q9NPH9 171 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 TAS2R13Q9NYV9 303 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 OPTCQ9UBM4 332 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 FAM50BQ9Y247 325 aa7.65□□□□□ -1.18
PDLIM5-221ENST00000542407 VPS9D1Q9Y2B5 631 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms