RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 OR2AG1Q9H205 316 aa14.65□□□□□ -0.06
CNOT9-208ENST00000542068 MOV10Q9HCE1 1003 aaKnown RBP14.65□□□□□ -0.06
CNOT9-208ENST00000542068 ANKHQ9HCJ1 492 aa14.65□□□□□ -0.06
CNOT9-208ENST00000542068 MKLN1Q9UL63 735 aa14.65□□□□□ -0.06
CNOT9-208ENST00000542068 CFL2Q9Y281 166 aa14.65□□□□□ -0.06
CNOT9-208ENST00000542068 YARS2Q9Y2Z4 477 aaKnown RBP14.65□□□□□ -0.06
CNOT9-208ENST00000542068 LAG3P18627 525 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 CSNK2BP67870 215 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 RAE1P78406 368 aaKnown RBP14.64□□□□□ -0.07
CNOT9-208ENST00000542068 RAET1GQ6H3X3 334 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 ADCK2Q7Z695 626 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 OR7G3Q8NG95 312 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 OR8J2Q8NGG1 315 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 OR2A14Q96R47 310 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 POLR2J2Q9GZM3 115 aaKnown RBP14.64□□□□□ -0.07
CNOT9-208ENST00000542068 NMNAT1Q9HAN9 279 aaPredicted RBP14.64□□□□□ -0.07
CNOT9-208ENST00000542068 USP34Q70CQ2 3546 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 TRBV4-1A0A0J9YWV2 114 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 GREM1O60565 184 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 TMCC2O75069 709 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 CATP04040 527 aaKnown RBP14.64□□□□□ -0.07
CNOT9-208ENST00000542068 PAMR1Q6UXH9 720 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 RBM45Q8IUH3 476 aaKnown RBP14.64□□□□□ -0.07
CNOT9-208ENST00000542068 TCEANCQ8N8B7 351 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 ZFP41Q8N8Y5 198 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 DTX3Q8N9I9 347 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 ASCC1Q8N9N2 400 aaKnown RBP14.64□□□□□ -0.07
CNOT9-208ENST00000542068 OR4K3Q96R72 315 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 CITED4Q96RK1 184 aa14.64□□□□□ -0.07
CNOT9-208ENST00000542068 ZNF197O14709 1029 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 KLK1P06870 262 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ADH1AP07327 375 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 WASP42768 502 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 RAB25P57735 213 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 TAS2R50P59544 299 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ST8SIA6P61647 398 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 OLR1P78380 273 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 Q6ZNB5 142 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 GRASPQ7Z6J2 395 aaPredicted RBP14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ABI3BPQ7Z7G0 1075 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 C7orf57Q8NEG2 295 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 OR2A12Q8NGT7 310 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CLP1Q92989 425 aaKnown RBP14.63□□□□□ -0.07
CNOT9-208ENST00000542068 TDP1Q9NUW8 608 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 TVP23BQ9NYZ1 205 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CCDC59Q9P031 241 aaKnown RBP14.63□□□□□ -0.07
CNOT9-208ENST00000542068 WASH3PC4AMC7 463 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 PLD2O14939 933 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 PCGF2P35227 344 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 NDUFA5Q16718 116 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 FBXO43Q4G163 708 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CNKSR3Q6P9H4 555 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CCDC190Q86UF4 302 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 UBQLNLQ8IYU4 475 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 PIK3R3Q92569 461 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 NEIL2Q969S2 332 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ACER3Q9NUN7 267 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CARD8Q9Y2G2 431 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 PADI2Q9Y2J8 665 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 HCN4Q9Y3Q4 1203 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ANKDD1BA6NHY2 528 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 NOTOA8MTQ0 251 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CYP17A1P05093 508 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CXCR2P25025 360 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 HOXC5Q00444 222 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ARHGEF6Q15052 776 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 PYDC2Q56P42 97 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 C22orf42Q6IC83 251 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 SHFQ7M4L6 423 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 NLRP8Q86W28 1048 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 ZNF740Q8NDX6 193 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 IRF7Q92985 503 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 TBC1D20Q96BZ9 403 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 PPCDCQ96CD2 204 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 DIRAS2Q96HU8 199 aa14.63□□□□□ -0.07
CNOT9-208ENST00000542068 MCCC1Q96RQ3 725 aaPredicted RBP14.63□□□□□ -0.07
CNOT9-208ENST00000542068 CRNNQ9UBG3 495 aaPredicted RBP14.63□□□□□ -0.07
CNOT9-208ENST00000542068 C1orf226A1L170 272 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 MEIOCA2RUB1 952 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 SEMA3DO95025 777 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 ITGB8P26012 769 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 HNMTP50135 292 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 ERVFC1P60507 584 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 HNRNPA0Q13151 305 aaKnown RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 KRR1Q13601 381 aaKnown RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 HTR3DQ70Z44 454 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 OPALINQ96PE5 141 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 SMAD5Q99717 465 aaKnown RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 SH2B3Q9UQQ2 575 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 FADS2P1A8MWK0 482 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 CPNE3O75131 537 aaKnown RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 CBSLP0DN79 551 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 PTNP21246 168 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 CBSP35520 551 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 RFX2P48378 723 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 CRISP1P54107 249 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 SNRPD2P62316 118 aaKnown RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 TMEM115Q12893 351 aaPredicted RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 PLAG1Q6DJT9 500 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 FRMPD2BQ6IN97 320 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms