RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 METTL2AQ96IZ6 378 aaKnown RBP14.59□□□□□ -0.07
DDB1-218ENST00000540784 PRDM9Q9NQV7 894 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 PRTFDC1Q9NRG1 225 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 PNPOQ9NVS9 261 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 ATG4BQ9Y4P1 393 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 CCL27Q9Y4X3 112 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 PTGDR2Q9Y5Y4 395 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 HS3ST3B1Q9Y662 390 aa14.59□□□□□ -0.07
DDB1-218ENST00000540784 A0A1W2PR48 441 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 BLACEA4D250 179 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 SOCS6O14544 535 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 PIP5K1BO14986 540 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 SNNO75324 88 aaPredicted RBP14.58□□□□□ -0.08
DDB1-218ENST00000540784 BUD31P41223 144 aaPredicted RBP14.58□□□□□ -0.08
DDB1-218ENST00000540784 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.08
DDB1-218ENST00000540784 HSD17B7P56937 341 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 ACTN3Q08043 901 aaPredicted RBP14.58□□□□□ -0.08
DDB1-218ENST00000540784 C18orf63Q68DL7 685 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 TMEM205Q6UW68 189 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 KIRREL2Q6UWL6 708 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 QSOX2Q6ZRP7 698 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 Q6ZSR9 355 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 MRGPREQ86SM8 312 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 ARFGAP2Q8N6H7 521 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 FAM76AQ8TAV0 307 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 TANKQ92844 425 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 FER1L6-AS2Q96M78 137 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 RPF2Q9H7B2 306 aaKnown RBP14.58□□□□□ -0.08
DDB1-218ENST00000540784 WDR41Q9HAD4 459 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 LRTM1Q9HBL6 345 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 C1orf109Q9NX04 203 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 SIRT5Q9NXA8 310 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 P4HTMQ9NXG6 502 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 C19orf25Q9UFG5 118 aaPredicted RBP14.58□□□□□ -0.08
DDB1-218ENST00000540784 MCM8Q9UJA3 840 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 HAO1Q9UJM8 370 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 MAN2B2Q9Y2E5 1009 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 MMACHCQ9Y4U1 282 aa14.58□□□□□ -0.08
DDB1-218ENST00000540784 FER1L5A0AVI2 2057 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 ANKRD11Q6UB99 2663 aaPredicted RBP14.57□□□□□ -0.08
DDB1-218ENST00000540784 GNG14A0A1W2PPG7 69 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 PCDH7O60245 1069 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 ACPPP15309 386 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 MAOAP21397 527 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 PRPH2P23942 346 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 HNRNPFP52597 415 aaKnown RBP14.57□□□□□ -0.08
DDB1-218ENST00000540784 EFNA3P52797 238 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 TRA2BP62995 288 aaKnown RBP14.57□□□□□ -0.08
DDB1-218ENST00000540784 RAE1P78406 368 aaKnown RBP14.57□□□□□ -0.08
DDB1-218ENST00000540784 ATP1A4Q13733 1029 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 NR6A1Q15406 480 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 GALNT18Q6P9A2 607 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 CPEB2Q7Z5Q1 589 aaKnown RBP14.57□□□□□ -0.08
DDB1-218ENST00000540784 TMEM52Q8NDY8 209 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 C7orf57Q8NEG2 295 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 C8orf44Q96CB5 159 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 TM4SF18Q96CE8 201 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 CSF3RQ99062 836 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 NECTIN3Q9NQS3 549 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 RIC8BQ9NVN3 520 aa14.57□□□□□ -0.08
DDB1-218ENST00000540784 LOC102723996A0A087X1L8 192 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 ARGFXA6NJG6 315 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 NPIPB8E9PQR5 432 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 SLCO1B7G3V0H7 640 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 SKAP2O75563 359 aaPredicted RBP14.56□□□□□ -0.08
DDB1-218ENST00000540784 ITGB2P05107 769 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 ANXA4P09525 319 aaPredicted RBP14.56□□□□□ -0.08
DDB1-218ENST00000540784 TIA1P31483 386 aaKnown RBP eCLIP14.56□□□□□ -0.08
DDB1-218ENST00000540784 RRADP55042 308 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 OR4D2P58180 307 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 OCRLQ01968 901 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 TNFRSF17Q02223 184 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 STX4Q12846 297 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 KIAA0040Q15053 153 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 PDCD2Q16342 344 aaPredicted RBP14.56□□□□□ -0.08
DDB1-218ENST00000540784 TBR1Q16650 682 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 NOXRED1Q6NXP6 359 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 BORAQ6PGQ7 559 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 NDUFAF7Q7L592 441 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 ANKRD37Q7Z713 158 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 CRLF3Q8IUI8 442 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 TMEM102Q8N9M5 508 aaPredicted RBP14.56□□□□□ -0.08
DDB1-218ENST00000540784 OR11G2Q8NGC1 345 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 OR2T11Q8NH01 316 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 APOBEC4Q8WW27 367 aaKnown RBP14.56□□□□□ -0.08
DDB1-218ENST00000540784 CKAP2Q8WWK9 683 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 TSLPQ969D9 159 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 C19orf60Q96EN9 201 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 C11orf24Q96F05 449 aaPredicted RBP14.56□□□□□ -0.08
DDB1-218ENST00000540784 PPP3R2Q96LZ3 170 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 C3orf30Q96M34 536 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 MAGEB18Q96M61 343 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 FAIM2Q9BWQ8 316 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 ATP13A2Q9NQ11 1180 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 VTI1BQ9UEU0 232 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 FBXL4Q9UKA2 621 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 KCNMB2Q9Y691 235 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 CELSR3Q9NYQ7 3312 aa14.56□□□□□ -0.08
DDB1-218ENST00000540784 ATP6AP2A0A1C7CYW4 349 aa14.55□□□□□ -0.08
DDB1-218ENST00000540784 GLOD5A6NK44 160 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms