RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 RAB38P57729 211 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 SARNPP82979 210 aaKnown RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 LTBQ06643 244 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 GPS1Q13098 491 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 SNTB1Q13884 538 aaKnown RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 CSHL1Q14406 222 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CRYMQ14894 314 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ZNF750Q32MQ0 723 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 FLYWCH1Q4VC44 716 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 TOR1AIP1Q5JTV8 583 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ZNF585AQ6P3V2 769 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 LYPD8Q6UX82 237 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 IL20RBQ6UXL0 311 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 SLCO4C1Q6ZQN7 724 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 RTL4Q6ZR62 310 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 GSTA5Q7RTV2 222 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CAMKMTQ7Z624 323 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CTAGE4Q8IX94 777 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.75□□□□□ -1.33
YBX3-209ENST00000540747 ZNF595Q8IYB9 648 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ULK2Q8IYT8 1036 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 TBC1D19Q8N5T2 526 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ZNF321PQ8N8H1 164 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 NAT8LQ8N9F0 302 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 NAXEQ8NCW5 288 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 LRRN4CLQ8ND94 238 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 MORN4Q8NDC4 146 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 WFDC11Q8NEX6 87 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 FAM222BQ8WU58 562 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 MAIP1Q8WWC4 291 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ATL1Q8WXF7 558 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ASB15Q8WXK1 588 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ALKBH8Q96BT7 664 aaKnown RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 MS4A6EQ96DS6 147 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 PDLIM5Q96HC4 596 aaKnown RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 SGCZQ96LD1 299 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 TSNARE1Q96NA8 513 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CSF3RQ99062 836 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CNPPD1Q9BV87 410 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 PARD6BQ9BYG5 372 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 RHBGQ9H310 441 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ZNF703Q9H7S9 590 aaPredicted RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 PLEKHF2Q9H8W4 249 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 PROK2Q9HC23 129 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 DMRT3Q9NQL9 472 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 PNO1Q9NRX1 252 aaKnown RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 IARS2Q9NSE4 1012 aaKnown RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 TUBA8Q9NY65 449 aaPredicted RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 FAM53CQ9NYF3 392 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 B4GALT7Q9UBV7 327 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 VTI1BQ9UEU0 232 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 GUCA1BQ9UMX6 200 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ERVK-11Q9UQG0 969 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ATG4BQ9Y4P1 393 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 HIVEP2P31629 2446 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 MPDZO75970 2070 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 LRIT2A6NDA9 550 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 SYNDIG1LA6NDD5 238 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 KDM4EB2RXH2 506 aaPredicted RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 FAM47E-STBD1D6RA91 191 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 GOLGA8MH3BSY2 632 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 WWP2O00308 870 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 PRAMEF4O60810 478 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 KRT14P02533 472 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 AHSGP02765 367 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 IGKV3-11P04433 115 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 HIST1H2AGP0C0S8 130 aaPredicted RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 RFPL3SP0C7P2 107 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 GABRA1P14867 456 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 HIST1H2ADP20671 130 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 SLC6A12P48065 614 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 ASCL1P50553 236 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 IL2P60568 153 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 RNF4P78317 190 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 BTN3A2P78410 334 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 IGLV3-21P80748 117 aaPredicted RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 CDKL1Q00532 357 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 PLGLB1Q02325 96 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 MPEG1Q2M385 716 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 ZNF791Q3KP31 576 aaPredicted RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 HECTD2Q5U5R9 776 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 PRAMEF9Q5VWM5 478 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 HSDL2Q6YN16 418 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 ZNF662Q6ZS27 426 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 TMPRSS11BQ86T26 416 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 THOC6Q86W42 341 aaKnown RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 PALM2Q8IXS6 379 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 LRRC25Q8N386 305 aaPredicted RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 TMEM132CQ8N3T6 1108 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 OR10Q1Q8NGQ4 319 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 OR14A16Q8NHC5 309 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 PAQR8Q8TEZ7 354 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 RNASE6Q93091 150 aaKnown RBP6.74□□□□□ -1.33
YBX3-209ENST00000540747 SARAFQ96BY9 339 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 NTNG2Q96CW9 530 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 HIST1H2AHQ96KK5 128 aa6.74□□□□□ -1.33
YBX3-209ENST00000540747 PWWP2AQ96N64 755 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms