RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 C16orf47Q6ZP98 133 aaPredicted RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 VN1R5Q7Z5H4 357 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 CLNKQ7Z7G1 428 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 CCDC71Q8IV32 467 aaPredicted RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 SRFBP1Q8NEF9 429 aaKnown RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 MYRIPQ8NFW9 859 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 PTPMT1Q8WUK0 201 aaPredicted RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 WDR34Q96EX3 536 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 PTCD3Q96EY7 689 aaKnown RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 SMC6Q96SB8 1091 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 CSF3RQ99062 836 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 EFCAB11Q9BUY7 163 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 ALOXE3Q9BYJ1 711 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 RHOJQ9H4E5 214 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 CNOT10Q9H9A5 744 aaKnown RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 LIN28AQ9H9Z2 209 aaKnown RBP11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 IL1RL2Q9HB29 575 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 LYRM4Q9HD34 91 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 PNPLA3Q9NST1 481 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 SACM1LQ9NTJ5 587 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 DNAJC11Q9NVH1 559 aa11.13□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM47E-STBD1D6RA91 191 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 AQP7O14520 342 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 SUSD5O60279 629 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 WDR1O75083 606 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 ZFP36L2P47974 494 aaKnown RBP11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 KCNC1P48547 511 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 NR0B1P51843 470 aaKnown RBP11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC12A2P55011 1212 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 RNF4P78317 190 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 CBLBQ13191 982 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 LAPTM5Q13571 262 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 PAGE2BQ5JRK9 111 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 B3GNT6Q6ZMB0 384 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 TRILQ7L0X0 811 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 TMEM200AQ86VY9 491 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 TMEM251Q8N6I4 163 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 SCYL1Q96KG9 808 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 KCNC2Q96PR1 638 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 TTYH2Q9BSA4 534 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 TMEM79Q9BSE2 394 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 MCMBPQ9BTE3 642 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 PRDM7Q9NQW5 492 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 WWOXQ9NZC7 414 aa11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF490Q9ULM2 529 aaPredicted RBP11.12□□□□□ -0.63
CBX3P4-202ENST00000540428 A0A0G2JMM0 328 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 A0A1W2PPB8 328 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 A0A1W2PRS3 328 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 NCF1BA6NI72 391 aaPredicted RBP11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 NCF1CA8MVU1 366 aaPredicted RBP11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 KIR3DP1A8MWS1 328 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 C17orf105B2RV13 164 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 E7ESA3 106 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 TAPBPO15533 448 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 PRAMEF4O60810 478 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 STK16O75716 305 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 KRT38O76015 456 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 SCELO95171 688 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 WISP3O95389 354 aaPredicted RBP11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 P04436 131 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 GLI4P10075 376 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 NCF1P14598 390 aaPredicted RBP11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 TNNI3P19429 210 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 MAGEA5P43359 124 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 ART1P52961 327 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 ATP6V0D1P61421 351 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 POU4F1Q01851 419 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 FOXO1Q12778 655 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 TBL3Q12788 808 aaKnown RBP11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 DOC2AQ14183 400 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 E2F2Q14209 437 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC10A1Q14973 349 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 TBCCQ15814 346 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 PDK4Q16654 411 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 HIST2H2ACQ16777 129 aaPredicted RBP11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 MPEG1Q2M385 716 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF750Q32MQ0 723 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 PRAMEF9Q5VWM5 478 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 HIST2H2AA3Q6FI13 130 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 ZNF585AQ6P3V2 769 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 GPSM1Q86YR5 675 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 FBXO36Q8NEA4 188 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 OR5M9Q8NGP3 310 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 OR10Q1Q8NGQ4 319 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 SLC2A12Q8TD20 617 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 SARAFQ96BY9 339 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 TSPAN17Q96FV3 270 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 CAPZA3Q96KX2 299 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 TBCDQ9BTW9 1192 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 OR8D2Q9GZM6 311 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 COPS7AQ9UBW8 275 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 ATG4BQ9Y4P1 393 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 PCDHGB3Q9Y5G1 929 aa11.11□□□□□ -0.63
CBX3P4-202ENST00000540428 FAM215AQ9Y5M1 114 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms