RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 C18orf63Q68DL7 685 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PROSER1Q86XN7 944 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FUNDC1Q8IVP5 155 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 RIMKLAQ8IXN7 391 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FAM9CQ8IZT9 166 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 UCN3Q969E3 161 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ERP27Q96DN0 273 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DDA1Q9BW61 102 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CLK4Q9HAZ1 481 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZNF304Q9HCX3 659 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 WBP11Q9Y2W2 641 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PCDHGA3Q9Y5H0 932 aa17.87■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C9orf172C9J069 976 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SLC22A3O75751 556 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 AIFM1O95831 613 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PRPS1L1P21108 318 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CPN2P22792 545 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 JAK1P23458 1154 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PIK3R1P27986 724 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 RORAP35398 523 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 AGKQ53H12 422 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 IKBIPQ70UQ0 350 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TREML1Q86YW5 311 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CSF3RQ99062 836 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZPBPQ9BS86 351 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ASPSCR1Q9BZE9 553 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ULBP3Q9BZM4 244 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CCDC86Q9H6F5 360 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SLC22A11Q9NSA0 550 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CCDC167Q9P0B6 97 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PHF11Q9UIL8 331 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CAPN7Q9Y6W3 813 aa17.86■□□□□ 0.45
TNFRSF1A-213ENST00000540022 WASHC1A8K0Z3 465 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FAM227AF5H4B4 570 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PRMT3O60678 531 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GUCY1B2O75343 617 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TNFSF15O95150 251 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PCSK2P16519 638 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ADSLP30566 484 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 RAB38P57729 211 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C21orf58P58505 322 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TNFRSF17Q02223 184 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DSG2Q14126 1118 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 HEPACAMQ14CZ8 416 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 UGT8Q16880 541 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FAM47BQ8NA70 645 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 OR51Q1Q8NH59 317 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 COL26A1Q96A83 441 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PEX11GQ96HA9 241 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CLMPQ9H6B4 373 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 REEP4Q9H6H4 257 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MRGBPQ9NV56 204 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MS4A12Q9NXJ0 267 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PCDHGA8Q9Y5G5 932 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PCDHA9Q9Y5H5 950 aa17.85■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GABRR3A8MPY1 467 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CAPN14A8MX76 684 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MEN1O00255 615 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CYR61O00622 381 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SCAMP2O15127 329 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FURINP09958 794 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PIM1P11309 404 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 RNH1P13489 461 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DDCP20711 480 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FBLP22087 321 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 BUD31P41223 144 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ALDH9A1P49189 494 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ABHD18Q0P651 414 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 NKAIN1Q4KMZ8 207 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ARHGAP40Q5TG30 622 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ANKRD26P1Q6NSI1 321 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GK5Q6ZS86 529 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 COX15Q7KZN9 410 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TRPM8Q7Z2W7 1104 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DSELQ8IZU8 1212 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TMEM52Q8NDY8 209 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 OR7A2PQ8NGA2 310 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FAIM2Q9BWQ8 316 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 RBCK1Q9BYM8 510 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 AKIRIN1Q9H9L7 192 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 POLR1BQ9H9Y6 1135 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FOXJ2Q9P0K8 574 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DKK4Q9UBT3 224 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ATP6V1HQ9UI12 483 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 MAP4K5Q9Y4K4 846 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CHD6Q8TD26 2715 aa17.84■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TEX51A0A1B0GUA7 166 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GLOD5A6NK44 160 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PGRMC2O15173 223 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SLC22A2O15244 555 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 STK17BO94768 372 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 NR2F6P10588 404 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SPTBP11277 2137 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DRD2P14416 443 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 HPCAL1P37235 193 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 POLR2JP52435 117 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 HNRNPFP52597 415 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 CLNS1AP54105 237 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 GABREP78334 506 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 DCDP81605 110 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms