RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SKAP2O75563 359 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 KLK1P06870 262 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 PRR35P0CG20 571 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 AGXTP21549 392 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 MTTPP55157 894 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 BTG2P78543 158 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 PHEXP78562 749 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 SLAMF1Q13291 335 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 RFTN2Q52LD8 501 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 C18orf63Q68DL7 685 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 PPP1R32Q7Z5V6 425 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 MTDHQ86UE4 582 aaKnown RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 PRSS58Q8IYP2 241 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 OR2Y1Q8NGV0 311 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 ACTRT2Q8TDY3 377 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 STARD8Q92502 1023 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 SLC45A3Q96JT2 553 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 CCNL2Q96S94 520 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 TUBB6Q9BUF5 446 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 NPLQ9BXD5 320 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 GPR87Q9BY21 358 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 VN1R1Q9GZP7 353 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 GPN2Q9H9Y4 310 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 MEAF6Q9HAF1 191 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 MKKSQ9NPJ1 570 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 TEX10Q9NXF1 929 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 ZNF282Q9UDV7 671 aaPredicted RBP12.24□□□□□ -0.45
CCDC42-202ENST00000539522 CDC14AQ9UNH5 594 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 TRIM33Q9UPN9 1127 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 DLGAP4Q9Y2H0 992 aa12.24□□□□□ -0.45
CCDC42-202ENST00000539522 PKD1L2Q7Z442 2459 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 IGKV3D-11A0A0A0MRZ8 115 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 ATP6AP2A0A1C7CYW4 349 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 ARHGAP10A1A4S6 786 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 URADA6NGE7 173 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 SOCS6O14544 535 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 CREG1O75629 220 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 ATP6AP2O75787 350 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
CCDC42-202ENST00000539522 RSL1D1O76021 490 aaKnown RBP12.23□□□□□ -0.45
CCDC42-202ENST00000539522 TACR1P25103 407 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 SSR2P43308 183 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 TSFMP43897 325 aaKnown RBP12.23□□□□□ -0.45
CCDC42-202ENST00000539522 PDCD2Q16342 344 aaPredicted RBP12.23□□□□□ -0.45
CCDC42-202ENST00000539522 SLC9B1Q4ZJI4 515 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 VWA5B1Q5TIE3 1220 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 GALNT18Q6P9A2 607 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 FAM47BQ8NA70 645 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 CEP70Q8NHQ1 597 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 NUDT8Q8WV74 236 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 TSLPQ969D9 159 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 TM4SF18Q96CE8 201 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 EBF4Q9BQW3 602 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 EBPLQ9BY08 206 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 LYRM4Q9HD34 91 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 TCF7L2Q9NQB0 619 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 NECTIN3Q9NQS3 549 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 PTRH2Q9Y3E5 179 aaKnown RBP12.23□□□□□ -0.45
CCDC42-202ENST00000539522 HS3ST3B1Q9Y662 390 aa12.23□□□□□ -0.45
CCDC42-202ENST00000539522 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 IDSB3KWA1 339 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 SDHDO14521 159 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 PROM1O43490 865 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 B3GALT2O43825 422 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 FHP07954 510 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 FAM58BPP0C7Q3 252 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 SOX18P35713 384 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 RAP1GDS1P52306 607 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 RAB38P57729 211 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 AP5B1Q2VPB7 878 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 LANCL3Q6ZV70 420 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 YTHDF3Q7Z739 585 aaKnown RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 NUDT13Q86X67 352 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 FITM2Q8N6M3 262 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 TBC1D20Q96BZ9 403 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 MIEF2Q96C03 454 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 C19orf60Q96EN9 201 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 MAELQ96JY0 434 aaKnown RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 EGLN2Q96KS0 407 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 PPP1R36Q96LQ0 422 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 MYLK2Q9H1R3 596 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 CLK4Q9HAZ1 481 aaKnown RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 MRGBPQ9NV56 204 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 ADAM29Q9UKF5 820 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 FBXW2Q9UKT8 454 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 CES1P1Q9UKY3 287 aa12.22□□□□□ -0.45
CCDC42-202ENST00000539522 POLR3HQ9Y535 204 aaPredicted RBP12.22□□□□□ -0.45
CCDC42-202ENST00000539522 MYOCOSA0A1B0GUC4 107 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 C9J4A7 227 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms