RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ZNF440Q8IYI8 595 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 MGARPQ8TDB4 240 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 LIPHQ8WWY8 451 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 EPSTI1Q96J88 318 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 ERGIC2Q96RQ1 377 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 RBM4BQ9BQ04 359 aaKnown RBP5.52□□□□□ -1.53
TRAV11-201ENST00000539512 PNPLA3Q9NST1 481 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 DNAJC11Q9NVH1 559 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 FOXA2Q9Y261 457 aaPredicted RBP5.52□□□□□ -1.53
TRAV11-201ENST00000539512 OR1A2Q9Y585 309 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 AUP1Q9Y679 476 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 WDR81Q562E7 1941 aa5.52□□□□□ -1.53
TRAV11-201ENST00000539512 SERINC4A6NH21 518 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 E9PQ18 207 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 G3V2L1 256 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 OGTO15294 1046 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 KIAA0513O60268 411 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 POP4O95707 220 aaKnown RBP5.51□□□□□ -1.53
TRAV11-201ENST00000539512 SFTPBP07988 381 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 NUDT17P0C025 328 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 ZNF18P17022 549 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 TNFSF10P50591 281 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 CCR4P51679 360 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 SRPXP78539 464 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 RAPSNQ13702 412 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 TRADDQ15628 312 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 B3GLCTQ6Y288 498 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 MCM10Q7L590 875 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 CACUL1Q86Y37 369 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 ZNF485Q8NCK3 441 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 ICA1LQ8NDH6 482 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 TCP11Q8WWU5 503 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 PDLIM5Q96HC4 596 aaKnown RBP5.51□□□□□ -1.53
TRAV11-201ENST00000539512 S1PR3Q99500 378 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 SSX3Q99909 188 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 ABCG4Q9H172 646 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 PARLQ9H300 379 aa5.51□□□□□ -1.53
TRAV11-201ENST00000539512 MRTO4Q9UKD2 239 aaKnown RBP5.51□□□□□ -1.53
TRAV11-201ENST00000539512 SPATA31D1Q6ZQQ2 1576 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 IGHV3-20A0A0C4DH32 117 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 ATP6AP2A0A1C7CYW4 349 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 HPRP00739 348 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 EPOP01588 193 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 TPBGLP0DKB5 382 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 ATP6V1E1P36543 226 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 FHITP49789 147 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 NT5C2P49902 561 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 GEMP55040 296 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 UCP2P55851 309 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 GFPT1Q06210 699 aaPredicted RBP5.5□□□□□ -1.53
TRAV11-201ENST00000539512 HEPACAMQ14CZ8 416 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 C1orf189Q5VU69 101 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 CAPN13Q6MZZ7 669 aaPredicted RBP5.5□□□□□ -1.53
TRAV11-201ENST00000539512 KCNMB4Q86W47 210 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 C17orf64Q86WR6 236 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 SERPINA12Q8IW75 414 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 FBXW8Q8N3Y1 598 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 SIDT2Q8NBJ9 832 aaKnown RBP5.5□□□□□ -1.53
TRAV11-201ENST00000539512 MIPOL1Q8TD10 442 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 CHPT1Q8WUD6 406 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 UBTD2Q8WUN7 234 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 ALKBH3Q96Q83 286 aaPredicted RBP5.5□□□□□ -1.53
TRAV11-201ENST00000539512 TNFRSF13CQ96RJ3 184 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 PKP2Q99959 881 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 CHCHD5Q9BSY4 110 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 UBXN6Q9BZV1 441 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 GFRA4Q9GZZ7 299 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 DCLRE1BQ9H816 532 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 MOB1AQ9H8S9 216 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 WDR41Q9HAD4 459 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 AKAP7Q9P0M2 348 aaPredicted RBP5.5□□□□□ -1.53
TRAV11-201ENST00000539512 UBQLN2Q9UHD9 624 aa5.5□□□□□ -1.53
TRAV11-201ENST00000539512 TCF20Q9UGU0 1960 aaKnown RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 IGHV3-38A0A0C4DH36 116 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 SYCE3A1L190 88 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 C5orf51A6NDU8 294 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 ANHXE9PGG2 379 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 ZNF749O43361 778 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 PCP11498 1178 aaKnown RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 RIDAP52758 137 aaKnown RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 FCHO2Q0JRZ9 810 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 CBX3Q13185 183 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 ZNF146Q15072 292 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 KNOP1Q1ED39 458 aaKnown RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 ZNF410Q86VK4 478 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 STHQ8IWL8 128 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 OR4N5Q8IXE1 308 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 PEX5LQ8IYB4 626 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 OR4A16Q8NH70 328 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 PCNPQ8WW12 178 aaKnown RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 CXorf58Q96LI9 332 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 PSMB7Q99436 277 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 NAP1L3Q99457 506 aaPredicted RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 ATF6BQ99941 703 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 AGPAT1Q99943 283 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 WWP1Q9H0M0 922 aa5.49□□□□□ -1.53
TRAV11-201ENST00000539512 TDRKHQ9Y2W6 561 aaKnown RBP5.49□□□□□ -1.53
TRAV11-201ENST00000539512 OR5H15A6NDH6 313 aa5.48□□□□□ -1.53
TRAV11-201ENST00000539512 SLC28A1O00337 649 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms