RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 AMER3Q8N944 861 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 ICA1LQ8NDH6 482 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 EME1Q96AY2 570 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 EXOSC8Q96B26 276 aaKnown RBP19.27■□□□□ 0.67
CDH5-202ENST00000539168 CENPNQ96H22 339 aaPredicted RBP19.27■□□□□ 0.67
CDH5-202ENST00000539168 TRAPPC9Q96Q05 1148 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 BTBD9Q96Q07 612 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 ELF4Q99607 663 aaPredicted RBP19.27■□□□□ 0.67
CDH5-202ENST00000539168 MACROD1Q9BQ69 325 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 AGPAT4Q9NRZ5 378 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 LRCH1Q9Y2L9 728 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 SLC22A7Q9Y694 548 aa19.27■□□□□ 0.67
CDH5-202ENST00000539168 PROM1O43490 865 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 NUDT21O43809 227 aaKnown RBP19.26■□□□□ 0.67
CDH5-202ENST00000539168 TIPRLO75663 272 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 TLX1P31314 330 aaPredicted RBP19.26■□□□□ 0.67
CDH5-202ENST00000539168 SOAT1P35610 550 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 SOX11P35716 441 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 SLC14A1Q13336 389 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 INTS11Q5TA45 600 aaKnown RBP19.26■□□□□ 0.67
CDH5-202ENST00000539168 SLC48A1Q6P1K1 146 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 BHLHB9Q6PI77 547 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 C1orf210Q8IVY1 113 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 ZDHHC12Q96GR4 267 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 RNF145Q96MT1 663 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 FCRL4Q96PJ5 515 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 BBS4Q96RK4 519 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 BDH2Q9BUT1 245 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 CHST8Q9H2A9 424 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 TMEM38AQ9H6F2 299 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 LYRM4Q9HD34 91 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 SEMA3GQ9NS98 782 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 THUMPD1Q9NXG2 353 aaKnown RBP19.26■□□□□ 0.67
CDH5-202ENST00000539168 FBXW2Q9UKT8 454 aa19.26■□□□□ 0.67
CDH5-202ENST00000539168 FAF1Q9UNN5 650 aaPredicted RBP19.26■□□□□ 0.67
CDH5-202ENST00000539168 A0A1W2PR48 441 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 C4orf51C9J302 202 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 YKT6O15498 198 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 PDGFBP01127 241 aaPredicted RBP19.25■□□□□ 0.67
CDH5-202ENST00000539168 STATHP02808 62 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 NTRK1P04629 796 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 NR2F6P10588 404 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 PVRP15151 417 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 PCGF2P35227 344 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 GPR3P46089 330 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 ELOAQ14241 798 aaKnown RBP19.25■□□□□ 0.67
CDH5-202ENST00000539168 ATP6AP1Q15904 470 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 GCNT6Q5T4J0 391 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 TMEM214Q6NUQ4 689 aaKnown RBP19.25■□□□□ 0.67
CDH5-202ENST00000539168 IRGCQ6NXR0 463 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 ANGPTL8Q6UXH0 198 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 RABEPKQ7Z6M1 372 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 MMP21Q8N119 569 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 CSNK1A1LQ8N752 337 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 MOAP1Q96BY2 351 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 NEURL3Q96EH8 262 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 DPH2Q9BQC3 489 aaPredicted RBP19.25■□□□□ 0.67
CDH5-202ENST00000539168 CHID1Q9BWS9 393 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 NPLQ9BXD5 320 aaPredicted RBP19.25■□□□□ 0.67
CDH5-202ENST00000539168 SYNPO2LQ9H987 977 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 FBXO4Q9UKT5 387 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 ATG4BQ9Y4P1 393 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 PRUNE2Q8WUY3 3088 aa19.25■□□□□ 0.67
CDH5-202ENST00000539168 RNF103-CHMP3A0A140T963 221 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 SDC3O75056 442 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 DEAF1O75398 565 aaPredicted RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 AIFM1O95831 613 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 LDLRP01130 860 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 ST6GAL1P15907 406 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 CNR2P34972 360 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 HOXD12P35452 270 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 CRATP43155 626 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 TXNL4AP83876 142 aaKnown RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 CSTF1Q05048 431 aaKnown RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 LRRC36Q1X8D7 754 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 PRSS53Q2L4Q9 553 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 ZNF630Q2M218 657 aaPredicted RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 TMEM64Q6YI46 380 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 ZNF551Q7Z340 670 aaPredicted RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 PTOV1Q86YD1 416 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 PACRGLQ8N7B6 248 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 SEPHS2Q99611 448 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 DUSP23Q9BVJ7 150 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 PILRBQ9UKJ0 227 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 ZNF780BQ9Y6R6 833 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 GON4LQ3T8J9 2241 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 TLCD2A6NGC4 264 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 MYO1GB0I1T2 1018 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 P2RX6O15547 441 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 CSNK2A2P19784 350 aaPredicted RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 KDELR2P33947 212 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 MPIP34949 423 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 PRIM2P49643 509 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 ANXA11P50995 505 aaKnown RBP19.24■□□□□ 0.67
CDH5-202ENST00000539168 TNFRSF17Q02223 184 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 SPIDRQ14159 915 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 CEBPEQ15744 281 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 ADRM1Q16186 407 aa19.24■□□□□ 0.67
CDH5-202ENST00000539168 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.24■□□□□ 0.67
CDH5-202ENST00000539168 SAXO2Q658L1 398 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms