RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 KIF26BQ2KJY2 2108 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 VPS26BQ4G0F5 336 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 C1orf189Q5VU69 101 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 CYB5D1Q6P9G0 228 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
CD4-208ENST00000538827 GPR180Q86V85 440 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 CA13Q8N1Q1 262 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 OR5T3Q8NGG3 340 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 VPS33AQ96AX1 596 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 TM4SF18Q96CE8 201 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 MMABQ96EY8 250 aaPredicted RBP13.38□□□□□ -0.27
CD4-208ENST00000538827 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 CTRCQ99895 268 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 TOR4AQ9NXH8 423 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 SH3BP4Q9P0V3 963 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 DHCR7Q9UBM7 475 aaKnown RBP13.38□□□□□ -0.27
CD4-208ENST00000538827 KLK13Q9UKR3 277 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 LOXL2Q9Y4K0 774 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 SCN2AQ99250 2005 aa13.38□□□□□ -0.27
CD4-208ENST00000538827 CROCCQ5TZA2 2017 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ZNF749O43361 778 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 SCRG1O75711 98 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 NSA2O95478 260 aaKnown RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 MT-CO3P00414 261 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 FURINP09958 794 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 MSL3P1P0C860 447 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 ALAS2P22557 587 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 BUD31P41223 144 aaPredicted RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 KIR3DL1P43629 444 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 LIM2P55344 173 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 RAB38P57729 211 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 MAT1AQ00266 395 aaKnown RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 PLIN5Q00G26 463 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 STX5Q13190 355 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 HEPACAMQ14CZ8 416 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 DPY19L1Q2PZI1 675 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ZNF385BQ569K4 471 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 CPTPQ5TA50 214 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 NDUFAF5Q5TEU4 345 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 C18orf63Q68DL7 685 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 OR4F3Q6IEY1 312 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 MRM1Q6IN84 353 aaKnown RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 NIPAL1Q6NVV3 410 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 SLC2A7Q6PXP3 512 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 DNAJC14Q6Y2X3 702 aaPredicted RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 GLRX5Q86SX6 157 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 PPP1R3BQ86XI6 285 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 TICAM1Q8IUC6 712 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 RIMKLAQ8IXN7 391 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ARHGEF39Q8N4T4 335 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 EXOSC8Q96B26 276 aaKnown RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 TESCQ96BS2 214 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 CLIP3Q96DZ5 547 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 OR52E6Q96RD3 313 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 CSF3RQ99062 836 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 PRPF18Q99633 342 aaKnown RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.37□□□□□ -0.27
CD4-208ENST00000538827 TMEM45AQ9NWC5 275 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 C5AR2Q9P296 337 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ATP6V1HQ9UI12 483 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 LEF1Q9UJU2 399 aaPredicted RBP13.37□□□□□ -0.27
CD4-208ENST00000538827 SRPK3Q9UPE1 567 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 NDUFAF1Q9Y375 327 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ATG4BQ9Y4P1 393 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 ASB4Q9Y574 426 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 MAU2Q9Y6X3 613 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 NUP210LQ5VU65 1888 aa13.37□□□□□ -0.27
CD4-208ENST00000538827 A0A1B0GX78 115 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 GLOD5A6NK44 160 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 H3BMH7 237 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 TMX2-CTNND1H3BSU7 103 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 FBP2O00757 339 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 DSCR3O14972 297 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 FOXS1O43638 330 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 DNAJB6O75190 326 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 UNC5CO95185 931 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 TIAF1O95411 115 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 IL6P05231 212 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 PGRP06401 933 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 T-ENOLP0DO92 83 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 PIM1P11309 404 aaPredicted RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 CCL4P13236 92 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 DDCP20711 480 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 FBLP22087 321 aaKnown RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 MAPK10P53779 464 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 ARSFP54793 590 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 EMP3P54852 163 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms