RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 IKBIPQ70UQ0 350 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ZNF547Q8IVP9 402 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
USP44-203ENST00000537435 C9orf43Q8TAL5 461 aaPredicted RBP13.66□□□□□ -0.22
USP44-203ENST00000537435 ZSWIM3Q96MP5 696 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ACAT2Q9BWD1 397 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 CPNE5Q9HCH3 593 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 MARK1Q9P0L2 795 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ANKMY1Q9P2S6 941 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 LAMA3Q16787 3333 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 EFCAB10A6NFE3 127 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 PLK4O00444 970 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 PI15O43692 258 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 DGKGP49619 791 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 LIM2P55344 173 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 REEP3Q6NUK4 255 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
USP44-203ENST00000537435 PARP16Q8N5Y8 322 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 UBE2E3Q969T4 207 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 NUS1Q96E22 293 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 ZDHHC5Q9C0B5 715 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 KLHL25Q9H0H3 589 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 KLK4Q9Y5K2 254 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 SH3D21A4FU49 640 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 TRIM43BA6NCK2 446 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 FFAR1O14842 300 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 BCHEP06276 602 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 ITGB8P26012 769 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 ACADLP28330 430 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 GTF2E2P29084 291 aaKnown RBP13.65□□□□□ -0.22
USP44-203ENST00000537435 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
USP44-203ENST00000537435 UGT2B15P54855 530 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 ERVFC1P60507 584 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 TSTQ16762 297 aaKnown RBP13.65□□□□□ -0.22
USP44-203ENST00000537435 PNCKQ6P2M8 343 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 TNFAIP8L2Q6P589 184 aaPredicted RBP13.65□□□□□ -0.22
USP44-203ENST00000537435 SLC30A8Q8IWU4 369 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 HORMAD2Q8N7B1 307 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 PDXPQ96GD0 296 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 MGLLQ99685 303 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 CDCA4Q9BXL8 241 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 SLAMF7Q9NQ25 335 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 CLN6Q9NWW5 311 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 QPCTLQ9NXS2 382 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 CNOT2Q9NZN8 540 aaKnown RBP13.65□□□□□ -0.22
USP44-203ENST00000537435 KCND3Q9UK17 655 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 ICKQ9UPZ9 632 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 UGT2A1Q9Y4X1 527 aa13.65□□□□□ -0.22
USP44-203ENST00000537435 MKI67P46013 3256 aaKnown RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 ARRDC5A6NEK1 342 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 RTCAO00442 366 aaKnown RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 MPZL2O60487 215 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 LINC00271P0C7V0 271 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 ZNF45Q02386 682 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 LEXMQ3ZCV2 418 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 PLPP4Q5VZY2 271 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 ZNF770Q6IQ21 691 aaPredicted RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 CYP4Z2PQ8N1L4 340 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 WDR36Q8NI36 951 aaKnown RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 SETD7Q8WTS6 366 aaKnown RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 SPATA7Q9P0W8 599 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 TRBV4-1A0A0J9YWV2 114 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 C5orf58C9J3I9 102 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 PLPP1O14494 284 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 KIAA0513O60268 411 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 PAPLNO95428 1278 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 FGF19O95750 216 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 DNTTP04053 509 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 CISD3P0C7P0 127 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 C6P13671 934 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 MAGEA10P43363 369 aaPredicted RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 PRKCDQ05655 676 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 DOC2BQ14184 412 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 DHCR24Q15392 516 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 FAM83HQ6ZRV2 1179 aaPredicted RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 C12orf40Q86WS4 652 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 FAM129CQ86XR2 697 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 KRT78Q8N1N4 520 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 CLIP4Q8N3C7 705 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 SLC38A5Q8WUX1 472 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 APOBEC4Q8WW27 367 aaKnown RBP13.64□□□□□ -0.23
USP44-203ENST00000537435 ARRDC3Q96B67 414 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 DPEP2Q9H4A9 486 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 C11orf16Q9NQ32 467 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 PRKAB1Q9Y478 270 aa13.64□□□□□ -0.23
USP44-203ENST00000537435 LTBP2Q14767 1821 aa13.63□□□□□ -0.23
USP44-203ENST00000537435 C17orf113A0A1B0GUU1 675 aa13.63□□□□□ -0.23
USP44-203ENST00000537435 ANKDD1BA6NHY2 528 aa13.63□□□□□ -0.23
USP44-203ENST00000537435 LZTS3O60299 673 aaPredicted RBP13.63□□□□□ -0.23
USP44-203ENST00000537435 MMP20O60882 483 aa13.63□□□□□ -0.23
USP44-203ENST00000537435 DLGAP3O95886 979 aa13.63□□□□□ -0.23
USP44-203ENST00000537435 CCL5P13501 91 aa13.63□□□□□ -0.23
USP44-203ENST00000537435 ALOX12P18054 663 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms