RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CD47Q08722 323 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SPDYE7PQ495Y7 208 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 COX20Q5RI15 118 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 IER5LQ5T953 404 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 CYP4Z1Q86W10 505 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 HS3ST5Q8IZT8 346 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 LMNTD1Q8N9Z9 388 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 TTC29Q8NA56 475 aaPredicted RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 OR2L5Q8NG80 312 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 NFKBIDQ8NI38 313 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 GIPC3Q8TF64 312 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 MAL2Q969L2 176 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 MSLNLQ96KJ4 702 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 ZNF300Q96RE9 604 aaPredicted RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 PITX2Q99697 317 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 DOK1Q99704 481 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SEMA3GQ9NS98 782 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 LYARQ9NX58 379 aaKnown RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 CLDND1Q9NY35 253 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 NDUFAF4Q9P032 175 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 ANKMY1Q9P2S6 941 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 MAP4K5Q9Y4K4 846 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PCDHGB1Q9Y5G3 927 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 GMPPBQ9Y5P6 360 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PIAS3Q9Y6X2 628 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 TRPM6Q9BX84 2022 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 A0A0J9YVX5 310 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 FEZF1A0PJY2 475 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 TNFRSF11BO00300 401 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SLC31A1O15431 190 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 GCM2O75603 506 aaPredicted RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 RHCEP18577 417 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PRKACGP22612 351 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 ELK4P28324 431 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 NUDT1P36639 197 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PIGAP37287 484 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 ALDH9A1P49189 494 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 TMBIM6P55061 237 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 RPS15AP62244 130 aaKnown RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 TEKQ02763 1124 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 C16orf72Q14CZ0 275 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 CEACAM20Q6UY09 585 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 ZNF852Q6ZMS4 543 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 CEP68Q76N32 757 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 AMIGO1Q86WK6 493 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 CLVS1Q8IUQ0 354 aaPredicted RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 SAMD14Q8IZD0 417 aaPredicted RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 ADGRF3Q8IZF5 1079 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 THAP11Q96EK4 314 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 MRGPRX1Q96LB2 322 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 ZNF607Q96SK3 696 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 BCL7BQ9BQE9 202 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SPATA5L1Q9BVQ7 753 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 RIBC2Q9H4K1 309 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 CXorf36Q9H7Y0 433 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 FGF22Q9HCT0 170 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 LHX9Q9NQ69 397 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 PRDM9Q9NQV7 894 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 GIMAP4Q9NUV9 329 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 TRNAU1APQ9NX07 287 aaKnown RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 VNN3Q9NY84 501 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 NDRG4Q9ULP0 352 aaKnown RBP12.91□□□□□ -0.34
SMG6-203ENST00000536871 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SNX8Q9Y5X2 465 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 HS3ST3A1Q9Y663 406 aa12.91□□□□□ -0.34
SMG6-203ENST00000536871 SH3BP5O60239 455 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 ETS2P15036 469 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 JUNDP17535 347 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 COL9A1P20849 921 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 PPP2R1BP30154 601 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 RRM2P31350 389 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 HMGA2P52926 109 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 CRYBA2P53672 197 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 IL5RAQ01344 420 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 MVKQ03426 396 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 RELAQ04206 551 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 CBX3Q13185 183 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 CDK5R2Q13319 367 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 DCTN2Q13561 401 aaKnown RBP12.9□□□□□ -0.34
SMG6-203ENST00000536871 LRRC32Q14392 662 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 KIR2DS3Q14952 304 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 RAB39AQ14964 217 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 ZNF425Q6IV72 752 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 UBE3DQ7Z6J8 389 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 SMRP1Q8NCR6 262 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 IPCEF1Q8WWN9 437 aaPredicted RBP12.9□□□□□ -0.34
SMG6-203ENST00000536871 LCN9Q8WX39 176 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 TAMM41Q96BW9 452 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 ISOC1Q96CN7 298 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 PIP5K1AQ99755 562 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 SORBS1Q9BX66 1292 aaKnown RBP12.9□□□□□ -0.34
SMG6-203ENST00000536871 ZNF556Q9HAH1 456 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 EXD2Q9NVH0 621 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 POFUT2Q9Y2G5 429 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 LYVE1Q9Y5Y7 322 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
SMG6-203ENST00000536871 IGKV1-8A0A0C4DH67 115 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms