RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMEFF2Q9UIK5 374 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SAMD4AQ9UPU9 718 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 R4GN57 208 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FOXD2O60548 495 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ITGAMP11215 1152 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ISL1P61371 349 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 HNRNPKP61978 463 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ELOCQ15369 112 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TEAD4Q15561 434 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF691Q5VV52 312 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GTF2IRD2BQ6EKJ0 949 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NOXRED1Q6NXP6 359 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GPR155Q7Z3F1 870 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 R3HCC1LQ7Z5L2 792 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GTF2IRD2Q86UP8 949 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR4E2Q8NGC2 313 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF566Q969W8 418 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NRBF2Q96F24 287 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PLEKHA8Q96JA3 519 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TSSK3Q96PN8 268 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GPN2Q9H9Y4 310 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 IL21RQ9HBE5 538 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TMEM165Q9HC07 324 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SPATA7Q9P0W8 599 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NAALAD2Q9Y3Q0 740 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 HEBP2Q9Y5Z4 205 aa12.34□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LOC100130705A0A1B0GUX0 176 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 TTC36A6NLP5 189 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 BTN3A3O00478 584 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 RFXANKO14593 260 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 NOL3O60936 208 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SCN2BO60939 215 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ZBTB11O95625 1053 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 GNSP15586 552 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 GPX2P18283 190 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 CD247P20963 164 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 MATN1P21941 496 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 PIGAP37287 484 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 CDKN2CP42773 168 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 KIR3DL1P43629 444 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 NEK2P51955 445 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 RAD23AP54725 363 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 IRF8Q02556 426 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 RELAQ04206 551 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 NEDD8Q15843 81 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ERICH5Q6P6B1 374 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SPESP1Q6UW49 350 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SLCO4C1Q6ZQN7 724 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 DCDC5Q6ZRR9 648 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ZNF551Q7Z340 670 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 TMEM179BQ7Z7N9 219 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SYT12Q8IV01 421 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SPARTQ8N0X7 666 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ZNF740Q8NDX6 193 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 OR8J2Q8NGG1 315 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 OR2L8Q8NGY9 312 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 NCLNQ969V3 563 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 C11orf24Q96F05 449 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ZC3H10Q96K80 434 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 FANCEQ9HB96 536 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SPASTQ9UBP0 616 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 DOLKQ9UPQ8 538 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.44
CDK5RAP3-202ENST00000536708 MUC6Q6W4X9 2439 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 EVPLLA8MZ36 301 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 B4GAT1O43505 415 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 NOBOXO60393 691 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 VIPP01282 170 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 SEMG1P04279 462 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 OCM2P0CE71 109 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 OCMP0CE72 109 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 MYF5P13349 255 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 HSD3B1P14060 373 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 EEF1B2P24534 225 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 HSD3B2P26439 372 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 PSMD7P51665 324 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 WNT3P56703 355 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 PPP1CAP62136 330 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 HHEXQ03014 270 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 LAPTM5Q13571 262 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ZNF528Q3MIS6 628 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 CPZQ66K79 652 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 TCEAL6Q6IPX3 200 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 ANKRD26P1Q6NSI1 321 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 C11orf74Q86VG3 221 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 GATAD2AQ86YP4 633 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 HS3ST5Q8IZT8 346 aa12.32□□□□□ -0.44
CDK5RAP3-202ENST00000536708 CENPSQ8N2Z9 138 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms