RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 HPF1Q9NWY4 346 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 GRHL1Q9NZI5 618 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 VTI1BQ9UEU0 232 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 ZNF490Q9ULM2 529 aaPredicted RBP12.22□□□□□ -0.45
RTN3-207ENST00000536011 PYCARDQ9ULZ3 195 aa12.22□□□□□ -0.45
RTN3-207ENST00000536011 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 K7EPI3 171 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
RTN3-207ENST00000536011 PRF1P14222 555 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 TNNI3P19429 210 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 HIST1H1TP22492 207 aaPredicted RBP12.21□□□□□ -0.45
RTN3-207ENST00000536011 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 CASQ1P31415 396 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 SSR2P43308 183 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 MAGEA4P43358 317 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 HNRNPFP52597 415 aaKnown RBP12.21□□□□□ -0.45
RTN3-207ENST00000536011 PHEXP78562 749 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 MRPS25P82663 173 aaKnown RBP12.21□□□□□ -0.45
RTN3-207ENST00000536011 C2orf54Q08AI8 447 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 BIKQ13323 160 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 AP5B1Q2VPB7 878 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 KBTBD12Q3ZCT8 623 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 FBXO48Q5FWF7 155 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 ARHGAP11AQ6P4F7 1023 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 RGS9BPQ6ZS82 235 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 CLNKQ7Z7G1 428 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 PSD4Q8NDX1 1056 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 TMEM52Q8NDY8 209 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 OR5L2Q8NGL0 311 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 OR8K3Q8NH51 312 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 C16orf52Q8NHV5 167 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 UBTD2Q8WUN7 234 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 MTFMTQ96DP5 389 aaKnown RBP12.21□□□□□ -0.45
RTN3-207ENST00000536011 CMTM7Q96FZ5 175 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 CSF3RQ99062 836 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 ALOXE3Q9BYJ1 711 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 MS4A12Q9NXJ0 267 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 MYOTQ9UBF9 498 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 PPT2Q9UMR5 302 aa12.21□□□□□ -0.45
RTN3-207ENST00000536011 TACC2O95359 2948 aa12.21□□□□□ -0.46
RTN3-207ENST00000536011 PCNX1Q96RV3 2341 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 DCHS2Q6V1P9 2916 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 A0A087X1B8 175 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 TGFBR3LH3BV60 316 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 CDC40O60508 579 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTN3-207ENST00000536011 OR2J2O76002 312 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 WISP2O76076 250 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 SCELO95171 688 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 TBX6O95947 436 aaPredicted RBP12.2□□□□□ -0.46
RTN3-207ENST00000536011 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 PCNAP12004 261 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 EPB42P16452 691 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 CD22P20273 847 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ATP5A1P25705 553 aaKnown RBP12.2□□□□□ -0.46
RTN3-207ENST00000536011 ELAVL4P26378 380 aaKnown RBP12.2□□□□□ -0.46
RTN3-207ENST00000536011 PTGER1P34995 402 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 GPR143P51810 404 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 GPX6P59796 221 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 HSF1Q00613 529 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 E2F2Q14209 437 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 FAM83EQ2M2I3 478 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 TMEM211Q6ICI0 200 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 KLC3Q6P597 504 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 GK5Q6ZS86 529 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 LAS2Q8IYD9 372 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ACOT4Q8N9L9 421 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 FAM57AQ8TBR7 257 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 FBXO25Q8TCJ0 367 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
RTN3-207ENST00000536011 CA5BP1Q8WTZ4 195 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ESAMQ96AP7 390 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 REPS1Q96D71 796 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 OR8D2Q9GZM6 311 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 PRDM7Q9NQW5 492 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTN3-207ENST00000536011 KCMF1Q9P0J7 381 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 PHF11Q9UIL8 331 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ZNF223Q9UK11 482 aaPredicted RBP12.2□□□□□ -0.46
RTN3-207ENST00000536011 ACOT9Q9Y305 439 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ASB1Q9Y576 335 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 ANGPTL3Q9Y5C1 460 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 CLDN16Q9Y5I7 305 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 NCOA6Q14686 2063 aaPredicted RBP12.2□□□□□ -0.46
RTN3-207ENST00000536011 OTOGQ6ZRI0 2925 aa12.2□□□□□ -0.46
RTN3-207ENST00000536011 C17orf105B2RV13 164 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 FANCGO15287 622 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 HS6ST1O60243 411 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PRAMEF4O60810 478 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 TPOP07202 933 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 EPORP19235 508 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 CPN2P22792 545 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 SSTR2P30874 369 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms