RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CDK1P06493 297 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 BMP4P12644 408 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 ALDH9A1P49189 494 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 PCBP3P57721 371 aaKnown RBP12.55□□□□□ -0.4
LDLR-203ENST00000535915 FPGSQ05932 587 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
LDLR-203ENST00000535915 TIGD6Q17RP2 521 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 MLIPQ5VWP3 458 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 CEACAM20Q6UY09 585 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 PAGE2Q7Z2X7 111 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 PDZD3Q86UT5 571 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 C17orf64Q86WR6 236 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 FAM129CQ86XR2 697 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 MMAAQ8IVH4 418 aaKnown RBP12.55□□□□□ -0.4
LDLR-203ENST00000535915 SFTPA1Q8IWL2 248 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 ETFBKMTQ8IXQ9 262 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 PLA2G15Q8NCC3 412 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 ST13P5Q8NFI4 369 aaPredicted RBP12.55□□□□□ -0.4
LDLR-203ENST00000535915 FAM129BQ96TA1 746 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 ZBTB20Q9HC78 741 aaPredicted RBP12.55□□□□□ -0.4
LDLR-203ENST00000535915 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 DUSP12Q9UNI6 340 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 HCN4Q9Y3Q4 1203 aa12.55□□□□□ -0.4
LDLR-203ENST00000535915 M0R082 166 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 M0R129 80 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 PLPP1O14494 284 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 TLL1O43897 1013 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 CDH3P22223 829 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 MAPK12P53778 367 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 RPS26P62854 115 aaKnown RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 DUSP7Q16829 419 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 AMZ2Q86W34 360 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 STX19Q8N4C7 294 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 SCAIQ8N9R8 606 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 CXorf40AQ8TE69 158 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 TFGQ92734 400 aaPredicted RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 RAD9AQ99638 391 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 SLIRPQ9GZT3 109 aaKnown RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 DCSTAMPQ9H295 470 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 GPC6Q9Y625 555 aaPredicted RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 ENPP4Q9Y6X5 453 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 CHD9Q3L8U1 2897 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 CCNB2O95067 398 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 IFNW1P05000 195 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 RB1P06400 928 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 STSP08842 583 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 CTSKP43235 329 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 KCNC4Q03721 635 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 ZNF234Q14588 700 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 REEP3Q6NUK4 255 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 SPRED2Q7Z698 418 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 SLC44A2Q8IWA5 706 aaPredicted RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 DCUN1D3Q8IWE4 304 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 TAGAPQ8N103 731 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 MFSD4AQ8N468 514 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 AQP11Q8NBQ7 271 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 DENND6BQ8NEG7 585 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 ZNF707Q96C28 371 aaPredicted RBP12.54□□□□□ -0.4
LDLR-203ENST00000535915 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 ZDHHC4Q9NPG8 344 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 PRDM8Q9NQV8 689 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 OSGIN1Q9UJX0 560 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 ICKQ9UPZ9 632 aa12.54□□□□□ -0.4
LDLR-203ENST00000535915 A8MVJ9 347 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 HEPACAM2A8MVW5 462 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 C5orf58C9J3I9 102 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 SH3BP5O60239 455 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 RHCEP18577 417 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 DDCP20711 480 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 MANFP55145 182 aaKnown RBP12.53□□□□□ -0.4
LDLR-203ENST00000535915 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
LDLR-203ENST00000535915 RPS26P11Q5JNZ5 115 aaPredicted RBP12.53□□□□□ -0.4
LDLR-203ENST00000535915 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
LDLR-203ENST00000535915 TNFAIP8L2Q6P589 184 aaPredicted RBP12.53□□□□□ -0.4
LDLR-203ENST00000535915 SLC30A8Q8IWU4 369 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 MCFD2Q8NI22 146 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 ZNF675Q8TD23 568 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 NEURL2Q9BR09 285 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 BTBD2Q9BX70 525 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 MROQ9BYG7 248 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 ABCG4Q9H172 646 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 FKBP14Q9NWM8 211 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 OXSR1O95747 527 aaPredicted RBP12.53□□□□□ -0.4
LDLR-203ENST00000535915 BCHEP06276 602 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 GADD45AP24522 165 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 LIMS1P48059 325 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 ST3GAL4Q11206 333 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 OXA1LQ15070 435 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 TMEM52BQ4KMG9 183 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 DEPDC1Q5TB30 811 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 HEATR4Q86WZ0 1026 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 ADGRF3Q8IZF5 1079 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 ANKRD53Q8N9V6 530 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 AIF1LQ9BQI0 150 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 SLAMF7Q9NQ25 335 aa12.53□□□□□ -0.4
LDLR-203ENST00000535915 CUEDC1Q9NWM3 386 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms