RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PLA2G16P53816 162 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 MTTPP55157 894 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 ALDH6A1Q02252 535 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 NAB1Q13506 487 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 LAPTM5Q13571 262 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 PDK4Q16654 411 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 XKR6Q5GH73 641 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 TRIM40Q6P9F5 258 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF793Q6ZN11 406 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 LRRC70Q7Z2Q7 622 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CMC1Q7Z7K0 106 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 SPPL2CQ8IUH8 684 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 LAS2Q8IYD9 372 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 ACBD4Q8NC06 268 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 STAG3L4Q8TBR4 150 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF473Q8WTR7 871 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 UBTD2Q8WUN7 234 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 SDCCAG3Q96C92 435 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CSF3RQ99062 836 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF559Q9BR84 538 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 EFCAB11Q9BUY7 163 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 MS4A8Q9BY19 250 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 RAB17Q9H0T7 212 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 LYRM4Q9HD34 91 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 PRTFDC1Q9NRG1 225 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CD274Q9NZQ7 290 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 TXNDC16Q9P2K2 825 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 RNF112Q9ULX5 631 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 CSPG4Q6UVK1 2322 aa9.37□□□□□ -0.91
CLSTN3-203ENST00000534830 DNAJC13O75165 2243 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 PHF3Q92576 2039 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 A0A088AWK7 358 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CCDC189A1A4V9 331 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CLDN4O14493 209 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 FCHO1O14526 889 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 ASNA1O43681 348 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CCNT2O60583 730 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CTNSO60931 367 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 KERAO60938 352 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 MYO1DO94832 1006 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 LTA4HP09960 611 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 FOSL1P15407 271 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF10P21506 573 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CERS1P27544 350 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CRABP2P29373 138 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 PPP2R1BP30154 601 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 STX2P32856 288 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 OC90Q02509 493 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 FOLH1Q04609 750 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CHIT1Q13231 466 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 EFTUD2Q15029 972 aaKnown RBP eCLIP9.36□□□□□ -0.915e-7■■■■■ 36.5
CLSTN3-203ENST00000534830 CEBPEQ15744 281 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 MAPKAPK3Q16644 382 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 SYT10Q6XYQ8 523 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 FGD2Q7Z6J4 655 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CENPLQ8N0S6 344 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CPSF7Q8N684 471 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 PPM1NQ8N819 430 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 SNX31Q8N9S9 440 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 FAM47BQ8NA70 645 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 FAM98AQ8NCA5 519 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 C16orf52Q8NHV5 167 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 RHEBL1Q8TAI7 183 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 PTPMT1Q8WUK0 201 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 CCT6BQ92526 530 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 NCLNQ969V3 563 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 NXNL1Q96CM4 212 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 VMP1Q96GC9 406 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 KCNC2Q96PR1 638 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 F2RL3Q96RI0 385 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 TREX2Q9BQ50 279 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 DEFB126Q9BYW3 111 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 ALG9Q9H6U8 611 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 NMRAL1Q9HBL8 299 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 ADAP2Q9NPF8 381 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 PNO1Q9NRX1 252 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 ZDHHC18Q9NUE0 388 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 NUDT4Q9NZJ9 180 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 VTI1BQ9UEU0 232 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 RPH3AQ9Y2J0 694 aaPredicted RBP9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 TSC22D4Q9Y3Q8 395 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 ZNF407Q9C0G0 2248 aa9.36□□□□□ -0.91
CLSTN3-203ENST00000534830 TRBV11-1A0A0K0K1C0 115 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 FOXO6A8MYZ6 492 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 NPIPA5E9PKD4 350 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 K7EPI3 171 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 UBXN8O00124 270 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 KLK8O60259 260 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ITGA10O75578 1167 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 MLYCDO95822 493 aa9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 FLNAP21333 2647 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 ATP5A1P25705 553 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-203ENST00000534830 IGLV3-21P80748 117 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms