RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LRATO95237 230 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 ANP32DO95626 131 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 MT-CO3P00414 261 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 EIF2S1P05198 315 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 ANKRD34CP0C6C1 535 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 DDCP20711 480 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 TACR1P25103 407 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 TLX1P31314 330 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 HNRNPH1P31943 449 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 CCKBRP32239 447 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 BSGP35613 385 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 BUD31P41223 144 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 HNRNPFP52597 415 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 PSME3P61289 254 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 PPP1CAP62136 330 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 RAE1P78406 368 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 HSD11B2P80365 405 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 ZFP36L1Q07352 338 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 KLC1Q07866 573 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 MAP7Q14244 749 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SPANXN4Q5MJ08 99 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SNAP47Q5SQN1 464 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 PHF19Q5T6S3 580 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 GARNL3Q5VVW2 1013 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 CDCP2Q5VXM1 449 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 FAM219BQ5XKK7 198 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 FBXO42Q6P3S6 717 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 TMPRSS9Q7Z410 1059 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 PRSS42Q7Z5A4 293 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 DHDDSQ86SQ9 333 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 ULK2Q8IYT8 1036 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SAMD14Q8IZD0 417 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 CACTIN-AS1Q8N1I8 211 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 GALNT15Q8N3T1 639 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 C16orf78Q8WTQ4 265 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 VPS33AQ96AX1 596 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 LRRC58Q96CX6 371 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 TM4SF19Q96DZ7 209 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 TEX37Q96LM6 180 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 GBP5Q96PP8 586 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SERINC2Q96SA4 455 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 MAP3K3Q99759 626 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 DUSP26Q9BV47 211 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 STRADBQ9C0K7 418 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 IRAK4Q9NWZ3 460 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 ADA2Q9NZK5 511 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 AKAP7Q9P0M2 348 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 TMEM9Q9P0T7 183 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SH3BP4Q9P0V3 963 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 PRDM4Q9UKN5 801 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 PSME2Q9UL46 239 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 CORO2BQ9UQ03 480 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 KLHL20Q9Y2M5 609 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SLC22A7Q9Y694 548 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 SPEGQ15772 3267 aa10.37□□□□□ -0.75
CCDC90B-218ENST00000533761 KNTC1P50748 2209 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 PRSS51A0A1B0GVH4 220 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 SLC9B1P1A6NJY1 282 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 A8MU76 341 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 H0YGG7 62 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 RNASET2O00584 256 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 FBP2O00757 339 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 RFXANKO14593 260 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 AKAP10O43572 662 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 KIF1CO43896 1103 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 CTSVO60911 334 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 SCELO95171 688 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 FAM58BPP0C7Q3 252 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 PVRP15151 417 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ST6GAL1P15907 406 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ALOX12P18054 663 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 PPIBP23284 216 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 TPP2P29144 1249 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 CSTF2P33240 577 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ID4P47928 161 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 TRPC1P48995 793 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ARF3P61204 181 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 KCNJ2P63252 427 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 C2orf80Q0P641 193 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ISXQ2M1V0 245 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 HES3Q5TGS1 186 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ARHGAP22Q7Z5H3 698 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 VN1R4Q7Z5H5 301 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 SLITRK4Q8IW52 837 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 FBXW8Q8N3Y1 598 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 KRTCAP2Q8N6L1 136 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 TNIP2Q8NFZ5 429 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 OR8J3Q8NGG0 315 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ADAMTS18Q8TE60 1221 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 GFM2Q969S9 779 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 CCDC74BQ96LY2 380 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 PANX1Q96RD7 426 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 CMKLR1Q99788 373 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 CLK4Q9HAZ1 481 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 NEUROD4Q9HD90 331 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 GIMAP4Q9NUV9 329 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 SEMA5BQ9P283 1151 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 ATP6V1HQ9UI12 483 aa10.36□□□□□ -0.75
CCDC90B-218ENST00000533761 A0A096LPI6 279 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms