RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NDUFAF7Q7L592 441 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 PAGE2Q7Z2X7 111 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 COMMD6Q7Z4G1 85 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 GPR180Q86V85 440 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF595Q8IYB9 648 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 AMER2Q8N7J2 671 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CLEC1AQ8NC01 280 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CHTF18Q8WVB6 975 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 VPS50Q96JG6 964 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 WDR77Q9BQA1 342 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ADNPQ9H2P0 1102 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 EML4Q9HC35 981 aaKnown RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF160Q9HCG1 818 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ATP13A2Q9NQ11 1180 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 PRTFDC1Q9NRG1 225 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 NMRK1Q9NWW6 199 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 LYARQ9NX58 379 aaKnown RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 AHSPQ9NZD4 102 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 C19orf25Q9UFG5 118 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 PHF11Q9UIL8 331 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 MRPS33Q9Y291 106 aaKnown RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ATG4BQ9Y4P1 393 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 MMACHCQ9Y4U1 282 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 TLN1Q9Y490 2541 aaKnown RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 UQCRHLA0A096LP55 91 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 NSG1A0A0A6YYJ2 146 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 A0A1W2PR48 441 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TCRBV16S1A1N1A0A5B0 115 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TMEM233B4DJY2 109 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 CLDN4O14493 209 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 PROM1O43490 865 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 ITM2AO43736 263 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 KALRNO60229 2985 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 LYPLA1O75608 230 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 UQCRHP07919 91 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 BGNP21810 368 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 SOX8P57073 446 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 AIMP2Q13155 320 aaKnown RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 LY6DQ14210 128 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 UGT3A2Q3SY77 523 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 SFT2D3Q587I9 215 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 C18orf63Q68DL7 685 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 CYP20A1Q6UW02 462 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 RNF165Q6ZSG1 346 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 CLNKQ7Z7G1 428 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 GALNT16Q8N428 558 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 C1orf52Q8N6N3 182 aaKnown RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 LSM14AQ8ND56 463 aaKnown RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 PPP1R14CQ8TAE6 165 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 MGARPQ8TDB4 240 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 C11orf24Q96F05 449 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 APIPQ96GX9 242 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 IMMP1LQ96LU5 166 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 PAIP2Q9BPZ3 127 aaKnown RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TUBB6Q9BUF5 446 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TUBB1Q9H4B7 451 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF395Q9H8N7 513 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-214ENST00000533209 RIC8BQ9NVN3 520 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF446Q9NWS9 450 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 MS4A12Q9NXJ0 267 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TUBD1Q9UJT1 453 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 FIS1Q9Y3D6 152 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 CCL27Q9Y4X3 112 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 DNAJC15Q9Y5T4 150 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 SPACA6W5XKT8 324 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 BOD1L1Q8NFC6 3051 aa11.25□□□□□ -0.61
SSBP3-214ENST00000533209 MED13Q9UHV7 2174 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 MYOCOSA0A1B0GUC4 107 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 BLACEA4D250 179 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 A6NL46 340 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 TMEM114B3SHH9 223 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 MKRN2OSH3BPM6 223 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 K7EM74 188 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 CTNSO60931 367 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 PRKRAO75569 313 aaKnown RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 AIFM1O95831 613 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 GRK2P25098 689 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 OR4D2P58180 307 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 ABCE1P61221 599 aaKnown RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 RAE1P78406 368 aaKnown RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 SLC13A2Q13183 592 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 SOWAHCQ53LP3 525 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 SH2D4BQ5SQS7 431 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 CCNYL2Q5T2Q4 361 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 PAPD4Q6PIY7 484 aaKnown RBP11.24□□□□□ -0.61
SSBP3-214ENST00000533209 CLYBLQ8N0X4 340 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 FDCSPQ8NFU4 85 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 AGR3Q8TD06 166 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 UCN3Q969E3 161 aa11.24□□□□□ -0.61
SSBP3-214ENST00000533209 ANKRD9Q96BM1 317 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms