RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CD22P20273 847 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 ELAVL4P26378 380 aaKnown RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 GPR143P51810 404 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 PLTPP55058 493 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 PLGLB1Q02325 96 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 CBLBQ13191 982 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 GRTP1Q5TC63 336 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 FGD2Q7Z6J4 655 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 CHERPQ8IWX8 916 aaKnown RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 PDPRQ8NCN5 879 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 SRFBP1Q8NEF9 429 aaKnown RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 STAG3L4Q8TBR4 150 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 VKORC1Q9BQB6 163 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 ROGDIQ9GZN7 287 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 PRDM7Q9NQW5 492 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 PPIEQ9UNP9 301 aaKnown RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 UTP11Q9Y3A2 253 aaKnown RBP16.57■□□□□ 0.24
PCF11-206ENST00000533018 PDZD2O15018 2839 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 DNAJC13O75165 2243 aa16.57■□□□□ 0.24
PCF11-206ENST00000533018 SUPT3HB4E1H0 165 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 FANCGO15287 622 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 LDB3O75112 727 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 SUPT3HO75486 399 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 FAM155BO75949 473 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 GSTA2P09210 222 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 TFEBP19484 476 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 GMPRP36959 345 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 GPX6P59796 221 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 ZKSCAN8Q15776 578 aaPredicted RBP16.56■□□□□ 0.24
PCF11-206ENST00000533018 AP5B1Q2VPB7 878 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 KBTBD12Q3ZCT8 623 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 CYS1Q717R9 158 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 LRRC70Q7Z2Q7 622 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 CMC1Q7Z7K0 106 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 TBC1D1Q86TI0 1168 aaPredicted RBP16.56■□□□□ 0.24
PCF11-206ENST00000533018 CD163Q86VB7 1156 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 ZFP62Q8NB50 900 aaPredicted RBP16.56■□□□□ 0.24
PCF11-206ENST00000533018 PSD4Q8NDX1 1056 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 OR52N2Q8NGI0 321 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 C16orf52Q8NHV5 167 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 FAM57AQ8TBR7 257 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 PTPMT1Q8WUK0 201 aaPredicted RBP16.56■□□□□ 0.24
PCF11-206ENST00000533018 UBE2E3Q969T4 207 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 SDCCAG3Q96C92 435 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 WDR34Q96EX3 536 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 UBXN10Q96LJ8 280 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 TBCDQ9BTW9 1192 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 DEFB127Q9H1M4 99 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 LYRM4Q9HD34 91 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 GRHL1Q9NZI5 618 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 MYOTQ9UBF9 498 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 VTI1BQ9UEU0 232 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 CLDN16Q9Y5I7 305 aa16.56■□□□□ 0.24
PCF11-206ENST00000533018 POLQO75417 2590 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 FAM166BA8MTA8 275 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 C17orf105B2RV13 164 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 SAP18O00422 153 aaKnown RBP16.55■□□□□ 0.24
PCF11-206ENST00000533018 RTCAO00442 366 aaKnown RBP16.55■□□□□ 0.24
PCF11-206ENST00000533018 OR6B1O95007 311 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 TGFB1P01137 390 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 SOX3P41225 446 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 SSR2P43308 183 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 ID2Q02363 134 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 SERTAD2Q14140 314 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 CMPK2Q5EBM0 449 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 MED27Q6P2C8 311 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 ARHGAP11AQ6P4F7 1023 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 CEP128Q6ZU80 1094 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 CHSY3Q70JA7 882 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 ACOT4Q8N9L9 421 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 MORN4Q8NDC4 146 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 OR14A16Q8NHC5 309 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 PHF10Q8WUB8 498 aaKnown RBP16.55■□□□□ 0.24
PCF11-206ENST00000533018 MAPKAP1Q9BPZ7 522 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 PHACTR1Q9C0D0 580 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 NMRAL1Q9HBL8 299 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 NUDT4Q9NZJ9 180 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 OPTCQ9UBM4 332 aa16.55■□□□□ 0.24
PCF11-206ENST00000533018 TMEM200CA6NKL6 621 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 G3V3Y1 287 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 UBXN8O00124 270 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ACOT7O00154 380 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ADAM10O14672 748 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 EPORP19235 508 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 CPN2P22792 545 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ATP5A1P25705 553 aaKnown RBP16.54■□□□□ 0.24
PCF11-206ENST00000533018 CASQ1P31415 396 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 KIR3DL1P43629 444 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 PPIAP62937 165 aaKnown RBP16.54■□□□□ 0.24
PCF11-206ENST00000533018 CAV1Q03135 178 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 DDX39BQ13838 428 aaKnown RBP16.54■□□□□ 0.24
PCF11-206ENST00000533018 TBCCQ15814 346 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 TMEM35AQ53FP2 167 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 PAOXQ6QHF9 649 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ZNF793Q6ZN11 406 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 UBE3DQ7Z6J8 389 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ISCA2Q86U28 154 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
PCF11-206ENST00000533018 GPALPP1Q8IXQ4 340 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ZNF321PQ8N8H1 164 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms