RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	NANOG	Q9H9S0	305 aa		18.8	■□□□□ 0.6
FGFR1-238	ENST00000532791	SMIM30	A4D0T7	59 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	FGF3	P11487	239 aa	Predicted RBP	18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	STOM	P27105	288 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	GRK1	Q15835	563 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	SPAG16	Q8N0X2	631 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR8J3	Q8NGG0	315 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	DEFB126	Q9BYW3	111 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ENAM	Q9NRM1	1142 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	SEC14L4	Q9UDX3	406 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	SCP2D1	Q9UJQ7	156 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ABCB7	O75027	752 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	TIA1	P31483	386 aa	Known RBP eCLIP	18.79	■□□□□ 0.6	9e-8	■■■□□ 17.6
FGFR1-238	ENST00000532791	CDK10	Q15131	360 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF404	Q494X3	552 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	SYCE2	Q6PIF2	218 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF773	Q6PK81	442 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	HSPA12B	Q96MM6	686 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	MVB12B	Q9H7P6	319 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	SH2B3	Q9UQQ2	575 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	DCK	P27707	260 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	PLCXD2	Q0VAA5	305 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ATG9B	Q674R7	924 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	FCRL3	Q96P31	734 aa	Predicted RBP	18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLAMF1	Q13291	335 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	RAB12	Q6IQ22	244 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	BEND4	Q6ZU67	534 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	PDSS2	Q86YH6	399 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	PEX13	Q92968	403 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	TGM7	Q96PF1	710 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	PCYT2	Q99447	389 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	PDE7B	Q9NP56	450 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ROBO1	Q9Y6N7	1651 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791		A0A1W2PQU0	124 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	LHCGR	P22888	699 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF84	P51523	738 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	GLT8D1	Q68CQ7	371 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	KRTCAP2	Q8N6L1	136 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791	MTMR10	Q9NXD2	777 aa		18.79	■□□□□ 0.6
FGFR1-238	ENST00000532791		A0A1B0GVC2	190 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	EMC8	O43402	210 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC9A3	P48764	834 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	E2F1	Q01094	437 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	MRPL49	Q13405	166 aa	Known RBP	18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	PLEKHG7	Q6ZR37	379 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZFAND4	Q86XD8	727 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	C12orf76	Q8N812	135 aa	Predicted RBP	18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	PSD4	Q8NDX1	1056 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	C16orf70	Q9BSU1	422 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	GPR174	Q9BXC1	333 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	TREM1	Q9NP99	234 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC35G1	Q2M3R5	365 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	DEFB134	Q4QY38	66 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SERINC5	Q86VE9	423 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	TSPEAR	Q8WU66	669 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	NSUN5	Q96P11	429 aa	Known RBP	18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	UNC119B	A6NIH7	251 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	DUX1	O43812	170 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SOX2	P48431	317 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	ARSF	P54793	590 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	PHC1	P78364	1004 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	C1orf61	Q13536	156 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	UBE2Q1	Q7Z7E8	422 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC22A16	Q86VW1	577 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC22A8	Q8TCC7	542 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	MKLN1	Q9UL63	735 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	FAAH	O00519	579 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	YES1	P07947	543 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	PTGR1	Q14914	329 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	SGCA	Q16586	387 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	KCTD18	Q6PI47	426 aa	Predicted RBP	18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	GSKIP	Q9P0R6	139 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	PPP4R1L	Q9P1A2	415 aa		18.78	■□□□□ 0.6
FGFR1-238	ENST00000532791	C2orf78	A6NCI8	922 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	H2BFM	P0C1H6	154 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	TBPL1	P62380	186 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	TECRL	Q5HYJ1	363 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	TAS1R3	Q7RTX0	852 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	RHEBL1	Q8TAI7	183 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	VRTN	Q9H8Y1	702 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	RMI1	Q9H9A7	625 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	TMEM165	Q9HC07	324 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	BEST1	O76090	585 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	CSF2RA	P15509	400 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	MAGEA2	P43356	314 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	RNF144A	P50876	292 aa	Predicted RBP	18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	GAS6	Q14393	721 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	RNF111	Q6ZNA4	994 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR8S1	Q8NH09	359 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	PTBP2	Q9UKA9	531 aa	Known RBP	18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	C1orf226	A1L170	272 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	HEPACAM2	A8MVW5	462 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	GSTT2	P0CG29	244 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	GRIA2	P42262	883 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	ENTPD1	P49961	510 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	MAB21L1	Q13394	359 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	NKAPL	Q5M9Q1	402 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	SLC27A4	Q6P1M0	643 aa		18.77	■□□□□ 0.6
FGFR1-238	ENST00000532791	DENND6B	Q8NEG7	585 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms