RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RUNDC3AQ59EK9 446 aa14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 MEDAGQ5VYS4 303 aa14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 ZSWIM9Q86XI8 627 aa14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 RPRD1BQ9NQG5 326 aaKnown RBP14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 GPN3Q9UHW5 284 aaPredicted RBP14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 CDC14AQ9UNH5 594 aa14.68□□□□□ -0.06
PCDHA3-202ENST00000532566 KNL1Q8NG31 2342 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 LSM1O15116 133 aaKnown RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 WBP4O75554 376 aaKnown RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 FHP07954 510 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ARNTP27540 789 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 AOAHP28039 575 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 MAP2K4P45985 399 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 CD47Q08722 323 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ENPP2Q13822 863 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 TMEM35AQ53FP2 167 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 IDNKQ5T6J7 187 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 IER5LQ5T953 404 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 LIPIQ6XZB0 460 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 HSDL2Q6YN16 418 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ZNF675Q8TD23 568 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 TSEN15Q8WW01 171 aaKnown RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 MAL2Q969L2 176 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ZIC5Q96T25 663 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 RNGTTO60942 597 aaKnown RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 HLA-DPB1P04440 258 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 CATSPEREQ5SY80 951 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 DPPA4Q7L190 304 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 TSPYL5Q86VY4 417 aaPredicted RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 TFAP2CQ92754 450 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 FEZF1A0PJY2 475 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 KLF8O95600 359 aaPredicted RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ECDO95905 644 aaPredicted RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 SLC15A1P46059 708 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ARFIP1P53367 373 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 AAK1Q2M2I8 961 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 FAM214AQ32MH5 1076 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ASPGQ86U10 573 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 TMEM173Q86WV6 379 aaPredicted RBP14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 MFSD2AQ8NA29 543 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 ASB11Q8WXH4 323 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 OSTF1Q92882 214 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 SLC22A12Q96S37 553 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 PREBQ9HCU5 417 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 HRASLS2Q9NWW9 162 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 NLGN3Q9NZ94 848 aa14.67□□□□□ -0.06
PCDHA3-202ENST00000532566 CCRL2O00421 344 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 MID1O15344 667 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 SERPINA3P01011 423 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 C5AR1P21730 350 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 FUT4P22083 530 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 GBX2P52951 348 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ID2Q02363 134 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 VEZF1Q14119 521 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 HNRNPA1L2Q32P51 320 aaKnown RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 FBXO46Q6PJ61 603 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 UBE2J2Q8N2K1 259 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 METTL2AQ96IZ6 378 aaKnown RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 TAPBPLQ9BX59 468 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 PAK6Q9NQU5 681 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 DCAF13Q9NV06 445 aaKnown RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ZNF860A6NHJ4 632 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 EMC8O43402 210 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 IGLV3-25P01717 112 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 TYRP1P17643 537 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 GSTM2P28161 218 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 GRIN2CQ14957 1233 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 RGNQ15493 299 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 SLC36A4Q6YBV0 504 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 MEIOBQ8N635 442 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ZNF527Q8NB42 609 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 OR51I1Q9H343 314 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ELL3Q9HB65 397 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 SEC14L4Q9UDX3 406 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 MKLN1Q9UL63 735 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 B4GALT2O60909 372 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 MLLT3P42568 568 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 CTSCP53634 463 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 CRISP1P54107 249 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 AMZ1Q400G9 498 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ARL9Q6T311 187 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ZNF551Q7Z340 670 aaPredicted RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ATP6V1C2Q8NEY4 427 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 NUP43Q8NFH3 380 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 OR8J1Q8NGP2 316 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 TCEAL4Q96EI5 215 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 BIRC8Q96P09 236 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 MMP27Q9H306 513 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 COMMD9Q9P000 198 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 EBF1Q9UH73 591 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 IFT52Q9Y366 437 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 MYO7AQ13402 2215 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 GPR37L1O60883 481 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 GIMD1P0DJR0 217 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 IFI30P13284 250 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 AHCYP23526 432 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ATP5A1P25705 553 aaKnown RBP14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 ITGB7P26010 798 aa14.66□□□□□ -0.06
PCDHA3-202ENST00000532566 SLC36A3Q495N2 470 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms