RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 HAX1O00165 279 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 ZNF354AO60765 605 aaPredicted RBP10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 TPM3P06753 285 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 TMIGD3P0DMS9 266 aaPredicted RBP10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 OGNP20774 298 aaKnown RBP10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 ARNTP27540 789 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 NMBRP28336 390 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 MAGEA1P43355 309 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 SCTRP47872 440 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 TRPC1P48995 793 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 RAB8AP61006 207 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 TNK1Q13470 666 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 NAE1Q13564 534 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 PLEKHM3Q6ZWE6 761 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 ZPLD1Q8TCW7 415 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 IGFBPL1Q8WX77 278 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 KCNJ9Q92806 393 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 SNF8Q96H20 258 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 TRIB1Q96RU8 372 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 KIFC1Q9BW19 673 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 UBTD1Q9HAC8 227 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 ZNF226Q9NYT6 803 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 BFARQ9NZS9 450 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 VTI1BQ9UEU0 232 aa10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 MRPS33Q9Y291 106 aaKnown RBP10.67□□□□□ -0.7
AMBRA1-207ENST00000529553 ANKRD33BA6NCL7 494 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 LRRC3CA6NJW4 275 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 A8MXE2 369 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 TGFBR3LH3BV60 316 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 WIPF1O43516 503 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 CTNSO60931 367 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 MBD3O95983 291 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 IFNA16P05015 189 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 PTMAP06454 111 aaKnown RBP10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 APRTP07741 180 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 SERPINA6P08185 405 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 TPM1P09493 284 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 PPP2R1BP30154 601 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 CPA2P48052 419 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 DIO3P55073 304 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 SLC13A2Q13183 592 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 KLF1Q13351 362 aaPredicted RBP10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 CHRFAM7AQ494W8 412 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 ARMC3Q5W041 872 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 LRRC8EQ6NSJ5 796 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 AADACL2Q6P093 401 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 CENPUQ71F23 418 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 CILP2Q8IUL8 1156 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 TC2NQ8N9U0 490 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 GIMAP7Q8NHV1 300 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 PARVBQ9HBI1 364 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 PROK2Q9HC23 129 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 RAB6BQ9NRW1 208 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 C6orf203Q9P0P8 240 aaPredicted RBP10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 IFNKQ9P0W0 207 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 PDE10AQ9Y233 779 aa10.66□□□□□ -0.7
AMBRA1-207ENST00000529553 ARHGAP21Q5T5U3 1957 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 SIAH2O43255 324 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CD5LO43866 347 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 RCBTB2O95199 551 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 HPNP05981 417 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 C8GP07360 202 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CRYGSP22914 178 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 THBS2P35442 1172 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 RAB38P57729 211 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 SESN2P58004 480 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 BTN3A2P78410 334 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CCZ1BP86790 482 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CCZ1P86791 482 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 GAB1Q13480 694 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CUL1Q13616 776 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 RUNX2Q13950 521 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CSHL1Q14406 222 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 DUPD1Q68J44 220 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 LUZP2Q86TE4 346 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 PALM2Q8IXS6 379 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 ZNF441Q8N8Z8 693 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 GABPB2Q8TAK5 448 aaPredicted RBP10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 NUBPLQ8TB37 319 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 SLC22A8Q8TCC7 542 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 ALG3Q92685 438 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 MFSD3Q96ES6 412 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 WDYHV1Q96HA8 205 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 FAR2Q96K12 515 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 UCN2Q96RP3 112 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 TM9SF2Q99805 663 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 ACBD3Q9H3P7 528 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 KLHL31Q9H511 634 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CXorf56Q9H5V9 222 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 CAMK2AQ9UQM7 478 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 MED16Q9Y2X0 877 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 COMMD10Q9Y6G5 202 aa10.65□□□□□ -0.7
AMBRA1-207ENST00000529553 TRIM3O75382 744 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 HIST1H2AGP0C0S8 130 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 FAM157CP0CG43 387 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 TNNI3P19429 210 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 HIST1H2ADP20671 130 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 GDF1P27539 372 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 SERPINB3P29508 390 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 RPL22P35268 128 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms