RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 C3orf62Q6ZUJ4 267 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 CMC1Q7Z7K0 106 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 ISCA2Q86U28 154 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 GPSM1Q86YR5 675 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 CCDC71Q8IV32 467 aaPredicted RBP7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 ZNF595Q8IYB9 648 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 KRT78Q8N1N4 520 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 SNX31Q8N9S9 440 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 PDPRQ8NCN5 879 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 PSD4Q8NDX1 1056 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 ARMC2Q8NEN0 867 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 ZNF473Q8WTR7 871 aaKnown RBP7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 PYROXD1Q8WU10 500 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 PHF10Q8WUB8 498 aaKnown RBP7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 EXT2Q93063 718 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 WDR34Q96EX3 536 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 SCYL1Q96KG9 808 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 RASL10BQ96S79 203 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 GPR22Q99680 433 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 RBBP8Q99708 897 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 NAPGQ99747 312 aaPredicted RBP7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 RUBCNLQ9H714 662 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 POPDC3Q9HBV1 291 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 ADAP2Q9NPF8 381 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 SEMA4BQ9NPR2 832 aaPredicted RBP7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 PLSCR2Q9NRY7 297 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 GPRC5BQ9NZH0 403 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 GRHL1Q9NZI5 618 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 CD274Q9NZQ7 290 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 MYOTQ9UBF9 498 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 VTI1BQ9UEU0 232 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 RNF6Q9Y252 685 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 YARS2Q9Y2Z4 477 aaKnown RBP7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 PCNX3Q9H6A9 2034 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
GPATCH4-214ENST00000529520 LRRC14BA6NHZ5 514 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 FAM159BA6NKW6 160 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 A8MVJ9 347 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 C17orf105B2RV13 164 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 NPIPA2E9PIF3 369 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 NPIPA3F8WFD2 350 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 UBXN8O00124 270 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CLDN4O14493 209 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CLGNO14967 610 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 GLSO94925 669 aaPredicted RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CELA3AP09093 270 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 STMN1P16949 149 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ATP5A1P25705 553 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 MSH2P43246 934 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 DNASE1L1P49184 302 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 SLC12A2P55011 1212 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 NUP107P57740 925 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 PPIAP62937 165 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 RNF4P78317 190 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 TFF3Q07654 80 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 C2orf54Q08AI8 447 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 PMPCAQ10713 525 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 E2F2Q14209 437 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 EFTUD2Q15029 972 aaKnown RBP eCLIP7.59□□□□□ -1.193e-6■■■■□ 23.5
GPATCH4-214ENST00000529520 ELAVL1Q15717 326 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 GXYLT1Q4G148 440 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 UBAP2Q5T6F2 1119 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 TRIM40Q6P9F5 258 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 MEX3BQ6ZN04 569 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 TMEM132CQ8N3T6 1108 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ACOT4Q8N9L9 421 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 POGLUT1Q8NBL1 392 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 TTLQ8NG68 377 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 OR2M7Q8NG81 312 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 OR5M9Q8NGP3 310 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 SLC2A12Q8TD20 617 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ZNF721Q8TF20 911 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CA5BP1Q8WTZ4 195 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ASB15Q8WXK1 588 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 KIAA1191Q96A73 305 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 PPWD1Q96BP3 646 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 PTCD3Q96EY7 689 aaKnown RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 RUNDC3BQ96NL0 473 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ATOH8Q96SQ7 321 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CPNE1Q99829 537 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 SPOCK3Q9BQ16 436 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 TREX2Q9BQ50 279 aaPredicted RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ERP44Q9BS26 406 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CAPS2Q9BXY5 557 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 MS4A8Q9BY19 250 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 TTTY12Q9BZ98 90 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CD244Q9BZW8 370 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 OR8D2Q9GZM6 311 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 OR51B5Q9H339 312 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 EHD1Q9H4M9 534 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ALG9Q9H6U8 611 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 NPDC1Q9NQX5 325 aaPredicted RBP7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 PNPLA3Q9NST1 481 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 HPF1Q9NWY4 346 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 ERVK-11Q9UQG0 969 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CLCA3PQ9Y6N3 262 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 CCDC168Q8NDH2 2452 aa7.59□□□□□ -1.19
GPATCH4-214ENST00000529520 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
GPATCH4-214ENST00000529520 ANKRD17O75179 2603 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-214ENST00000529520 SPG11Q96JI7 2443 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms