RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 EXO1Q9UQ84 846 aaKnown RBP11.48□□□□□ -0.57
TRAF3IP2-211ENST00000528599 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SEC16AO15027 2179 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ANKRD11Q6UB99 2663 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CFAP73A6NFT4 308 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CDRT15L2A8MXV6 281 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 FAM227AF5H4B4 570 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PROM1O43490 865 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PRKRAO75569 313 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 UBOX5O94941 541 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 IL3P08700 152 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 IDO1P14902 403 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RBMS1P29558 406 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NME5P56597 212 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RTP5Q14D33 572 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GSTA3Q16772 222 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SPRED3Q2MJR0 410 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ARHGAP40Q5TG30 622 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 C18orf63Q68DL7 685 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 FAM71E1Q6IPT2 247 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 FAM199XQ6PEV8 388 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 IGF2-ASQ6U949 168 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TMEM52Q8NDY8 209 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 OR51Q1Q8NH59 317 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GFM2Q969S9 779 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PEX11GQ96HA9 241 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TEX37Q96LM6 180 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CNTNAP3BQ96NU0 1288 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TUBB6Q9BUF5 446 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CNTNAP3Q9BZ76 1288 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SDR39U1Q9NRG7 319 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TRPC4Q9UBN4 977 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 TRIM33Q9UPN9 1127 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PCDHGA7Q9Y5G6 932 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 COPG1Q9Y678 874 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CAPN7Q9Y6W3 813 aa11.47□□□□□ -0.57
TRAF3IP2-211ENST00000528599 WASHC1A8K0Z3 465 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CYR61O00622 381 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 AKAP10O43572 662 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 JRKO75564 520 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 LRATO95237 230 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 AIFM1O95831 613 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RNH1P13489 461 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CD1EP15812 388 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 GPX3P22352 226 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CPN2P22792 545 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 XCR1P46094 333 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 HNRNPFP52597 415 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RAB38P57729 211 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 UFM1P61960 85 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 KLC1Q07866 573 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 C2orf80Q0P641 193 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ERV3-1Q14264 604 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NDUFAF5Q5TEU4 345 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 C6orf15Q6UXA7 325 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 UNQ6494/PRO21346Q6UXR6 183 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 ZNF517Q6ZMY9 492 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 FAM47BQ8NA70 645 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 RBCK1Q9BYM8 510 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NMUR2Q9GZQ4 415 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CHST8Q9H2A9 424 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SAR1AQ9NR31 198 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 CTSFQ9UBX1 484 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 PHF11Q9UIL8 331 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.57
TRAF3IP2-211ENST00000528599 SDK2Q58EX2 2172 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 GLOD5A6NK44 160 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 FCHO1O14526 889 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PGRMC2O15173 223 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 BRINP1O60477 761 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CNOT3O75175 753 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 KLK3P07288 261 aaPredicted RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 AGXTP21549 392 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 IL12AP29459 219 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ASMTP46597 345 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MRPL19P49406 292 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ATP4BP51164 291 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CLDN8P56748 225 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 FOXL2P58012 376 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TNFRSF17Q02223 184 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 UBAP2LQ14157 1087 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 RPS6KA2Q15349 733 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PDCD4Q53EL6 469 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 VWA2Q5GFL6 755 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 PAOXQ6QHF9 649 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 OVCH1Q7RTY7 1134 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TMEM151BQ8IW70 566 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 ZC3H7AQ8IWR0 971 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 RIMKLAQ8IXN7 391 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 TMEM132CQ8N3T6 1108 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 CPSF7Q8N684 471 aaKnown RBP11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 OR9I1Q8NGQ6 314 aa11.46□□□□□ -0.58
TRAF3IP2-211ENST00000528599 MR1Q95460 341 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms