RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 KIF18BQ86Y91 864 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 ANKRD53Q8N9V6 530 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 OR8K3Q8NH51 312 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 SLC22A8Q8TCC7 542 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 KIAA1191Q96A73 305 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 SMIM10Q96HG1 83 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 SCYL1Q96KG9 808 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 RUNDC3BQ96NL0 473 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 NAT9Q9BTE0 207 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 OR8D2Q9GZM6 311 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 GSX1Q9H4S2 264 aaPredicted RBP10.7□□□□□ -0.7
CMTM1-211ENST00000528484 ZNF223Q9UK11 482 aaPredicted RBP10.7□□□□□ -0.7
CMTM1-211ENST00000528484 SLC22A14Q9Y267 594 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 PCDHGB3Q9Y5G1 929 aa10.7□□□□□ -0.7
CMTM1-211ENST00000528484 A0A0G2JMM0 328 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 A0A0G2JN53 185 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 A0A1W2PPB8 328 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 A0A1W2PRS3 328 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 KIR3DP1A8MWS1 328 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 PRKNO60260 465 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-211ENST00000528484 CTNSO60931 367 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 CCDC175P0C221 793 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 BMP5P22003 454 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 PPP2R1BP30154 601 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 ADH7P40394 386 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 DNASE1L1P49184 302 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 HK2P52789 917 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 CDKN2DP55273 166 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 ADAM8P78325 824 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 CRYMQ14894 314 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 HYAL4Q2M3T9 481 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 DEFB113Q30KQ7 82 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 RBM20Q5T481 1227 aaKnown RBP10.69□□□□□ -0.7
CMTM1-211ENST00000528484 RTL6Q6ICC9 239 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 FAM45BPQ6NSW5 357 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 TMIGD1Q6UXZ0 262 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 MAATS1Q7Z4T9 603 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 LIX1LQ8IVB5 337 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.69□□□□□ -0.7
CMTM1-211ENST00000528484 KLHDC8AQ8IYD2 350 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 FAM45AQ8TCE6 357 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 RNASE6Q93091 150 aaKnown RBP10.69□□□□□ -0.7
CMTM1-211ENST00000528484 MAGOHBQ96A72 148 aaKnown RBP10.69□□□□□ -0.7
CMTM1-211ENST00000528484 SERINC2Q96SA4 455 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 CAPS2Q9BXY5 557 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 REXO4Q9GZR2 422 aaKnown RBP10.69□□□□□ -0.7
CMTM1-211ENST00000528484 SPNS1Q9H2V7 528 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 LIME1Q9H400 295 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 NEUROD4Q9HD90 331 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 DMRT3Q9NQL9 472 aa10.69□□□□□ -0.7
CMTM1-211ENST00000528484 LRIT2A6NDA9 550 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 TUBAL3A6NHL2 446 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 C17orf105B2RV13 164 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 WDR47O94967 919 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 GOSR1O95249 250 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 IL2RAP01589 272 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 C1GALT1C1LP0DN25 315 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 MAGEA3P43357 314 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 PLA2G16P53816 162 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 MTTPP55157 894 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 RNF4P78317 190 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SNTB1Q13884 538 aaKnown RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 RUNX2Q13950 521 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SLBPQ14493 270 aaKnown RBP eCLIP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SPANXN3Q5MJ09 141 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SLC22A10Q63ZE4 541 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 GALNT7Q86SF2 657 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 PPIL6Q8IXY8 311 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 DND1Q8IYX4 353 aaKnown RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 TRIM58Q8NG06 486 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 OR2L5Q8NG80 312 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SLC2A12Q8TD20 617 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 GRK7Q8WTQ7 553 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SREK1Q8WXA9 508 aaKnown RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SLCO2A1Q92959 643 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 MS4A6EQ96DS6 147 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 C18orf12Q96KH6 178 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 NAP1L3Q99457 506 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 YIPF4Q9BSR8 244 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 ROGDIQ9GZN7 287 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 PITHD1Q9GZP4 211 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 DLL4Q9NR61 685 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 RYDENQ9NUL5 291 aaKnown RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 TUBA8Q9NY65 449 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 ZNF629Q9UEG4 869 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 VTI1BQ9UEU0 232 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 RPH3AQ9Y2J0 694 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 VWA7Q9Y334 891 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 ATG4BQ9Y4P1 393 aa10.68□□□□□ -0.7
CMTM1-211ENST00000528484 HRNRQ86YZ3 2850 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-211ENST00000528484 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 C15orf38-AP3S2A0A0A6YYH1 394 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CES2O00748 559 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CLEC3AO75596 197 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 AHSGP02765 367 aa10.67□□□□□ -0.7
CMTM1-211ENST00000528484 CCL3P10147 92 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms