RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TNNI3P19429 210 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 BUD31P41223 144 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-215ENST00000528396 ARFIP1P53367 373 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 MLLT10P55197 1068 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 NAA20P61599 178 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 TLR1Q15399 786 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 KRT71Q3SY84 523 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 UNC50Q53HI1 259 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 ZNF793Q6ZN11 406 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 GPR180Q86V85 440 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 C7orf57Q8NEG2 295 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SUN3Q8TAQ9 357 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 WDR20Q8TBZ3 569 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 METTL6Q8TCB7 284 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SREK1Q8WXA9 508 aaKnown RBP12.55□□□□□ -0.4
CAPN1-215ENST00000528396 L3HYPDHQ96EM0 354 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SMC6Q96SB8 1091 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 ZNF382Q96SR6 550 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 CSF3RQ99062 836 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 MAPKAP1Q9BPZ7 522 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SLC29A3Q9BZD2 475 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 WDR41Q9HAD4 459 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 ZBTB20Q9HC78 741 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-215ENST00000528396 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 NECTIN3Q9NQS3 549 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 LYARQ9NX58 379 aaKnown RBP12.55□□□□□ -0.4
CAPN1-215ENST00000528396 PSD3Q9NYI0 1048 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 STMN3Q9NZ72 180 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SLC12A4Q9UP95 1085 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SCN2AQ99250 2005 aa12.55□□□□□ -0.4
CAPN1-215ENST00000528396 SAGE2PA6NJ88 616 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 PYCARD-AS1I3L0S3 204 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 CYR61O00622 381 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 PPP6CO00743 305 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 CTNSO60931 367 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 ERLIN1O75477 346 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 OR4F21O95013 312 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 SEMA3DO95025 777 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 SCELO95171 688 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 COX7A2P14406 83 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 PPP2R1BP30154 601 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
CAPN1-215ENST00000528396 CD97P48960 835 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 HNRNPFP52597 415 aaKnown RBP12.54□□□□□ -0.4
CAPN1-215ENST00000528396 PKNOX1P55347 436 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 SLC26A5P58743 744 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 ASPHQ12797 758 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 SERTAD2Q14140 314 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 B3GNTL1Q67FW5 361 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-215ENST00000528396 LETMD1Q6P1Q0 360 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 SCUBE1Q8IWY4 988 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 ZCCHC7Q8N3Z6 543 aaKnown RBP12.54□□□□□ -0.4
CAPN1-215ENST00000528396 MREGQ8N565 214 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 MYRIPQ8NFW9 859 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 CPT1CQ8TCG5 803 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 APOPT1Q96IL0 206 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 DEFB126Q9BYW3 111 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 CENPHQ9H3R5 247 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 LGALS13Q9UHV8 139 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 EMCNQ9ULC0 261 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 PPT2Q9UMR5 302 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
CAPN1-215ENST00000528396 IGKV3D-11A0A0A0MRZ8 115 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 G3V2L1 256 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 MANBAO00462 879 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 RGS16O15492 202 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 DYRK3O43781 588 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ULK1O75385 1050 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ETHE1O95571 254 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 PDYNP01213 254 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ENO1P06733 434 aaKnown RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 FAM58BPP0C7Q3 252 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 NR2F6P10588 404 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 SOX11P35716 441 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 NAGLUP54802 743 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TNFRSF17Q02223 184 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 SLC18A2Q05940 514 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TERF2Q15554 542 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 MEP1AQ16819 746 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 PLEKHN1Q494U1 663 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ACER2Q5QJU3 275 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 CCNYL2Q5T2Q4 361 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 FCRLBQ6BAA4 426 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 IGFL2Q6UWQ7 119 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TMEM132CQ8N3T6 1108 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TMEM52Q8NDY8 209 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 PSMF1Q92530 271 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TANKQ92844 425 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 DAZLQ92904 295 aaKnown RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 MRPL1Q9BYD6 325 aaKnown RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 ALOXE3Q9BYJ1 711 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms