RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ELAVL1Q15717 326 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 TUBA3EQ6PEY2 450 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 FAM180AQ6UWF9 173 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 MILR1Q7Z6M3 343 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 TMEM132CQ8N3T6 1108 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 HORMAD2Q8N7B1 307 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 BCORP1Q8N888 145 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 APCDD1LQ8NCL9 501 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 ST6GALNAC3Q8NDV1 305 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 OR52B6Q8NGF0 335 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 DNAJB8Q8NHS0 232 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZNF483Q8TF39 744 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 MZB1Q8WU39 189 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 VMP1Q96GC9 406 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 CSF3RQ99062 836 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 SERPINI1Q99574 410 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 ALOXE3Q9BYJ1 711 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 DEFB126Q9BYW3 111 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 CDCP1Q9H5V8 836 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 DDX31Q9H8H2 851 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 TRIM45Q9H8W5 580 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 PNO1Q9NRX1 252 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 DCDC2Q9UHG0 476 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 PHF11Q9UIL8 331 aa11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-209ENST00000528230 ANKUB1A6NFN9 424 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 A8MT66 165 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 SAP18O00422 153 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 PLPP1O14494 284 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 SH3BGRLO75368 114 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 MYO1DO94832 1006 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 SEMA3DO95025 777 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 OTCP00480 354 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 F10P00742 488 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 CRYABP02511 175 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 TLX1P31314 330 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 BSGP35613 385 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 ARL1P40616 181 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 MLF1P58340 268 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 HERVK_113P63132 956 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 MRPL49Q13405 166 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 FRG2Q64ET8 278 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 FCRLBQ6BAA4 426 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 GPR180Q86V85 440 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 TDRPQ86YL5 185 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 SLC22A9Q8IVM8 553 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 GSPT2Q8IYD1 628 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 RNF175Q8N4F7 328 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 KIF2BQ8N4N8 673 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 MORN4Q8NDC4 146 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 MDS2Q8NDY4 140 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 OR4F6Q8NGB9 312 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 TANKQ92844 425 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 DAZLQ92904 295 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 NSUN5Q96P11 429 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 CDK15Q96Q40 435 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 FRG2BQ96QU4 278 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 ERVK-6Q9BXR3 956 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZNF717Q9BY31 904 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 LYARQ9NX58 379 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 AHSPQ9NZD4 102 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 FBXW2Q9UKT8 454 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 CLCA3PQ9Y6N3 262 aa11.31□□□□□ -0.6
TRAPPC4-209ENST00000528230 A0A0A6YYD5 115 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 GABRR3A8MPY1 467 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 FCHO1O14526 889 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 PROM1O43490 865 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 MAN1A2O60476 641 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 DLX3O60479 287 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 RASAL1O95294 804 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 IFNA16P05015 189 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 PYGBP11216 843 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 CD46P15529 392 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 IMPDH1P20839 514 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 ATP5F1P24539 256 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 TRHRP34981 398 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 HSD17B3P37058 310 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 NEK2P51955 445 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 IGLV3-21P80748 117 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 CLCQ05315 142 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 IFT88Q13099 833 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 OR1C1Q15619 314 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 EIF2S3LQ2VIR3 472 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 ZNF766Q5HY98 468 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 TTC19Q6DKK2 380 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 MRM1Q6IN84 353 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 CLNKQ7Z7G1 428 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 NUDT13Q86X67 352 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 OR14A16Q8NHC5 309 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 ANKRD9Q96BM1 317 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 SCMH1Q96GD3 660 aa11.3□□□□□ -0.6
TRAPPC4-209ENST00000528230 TAAR6Q96RI8 345 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms