RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PDIK1LQ8N165 341 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 KRT78Q8N1N4 520 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 MORN4Q8NDC4 146 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 OR10Q1Q8NGQ4 319 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 DAZLQ92904 295 aaKnown RBP21.83■■□□□ 1.09
CPSF1-202ENST00000527827 SLCO2A1Q92959 643 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 POM121Q96HA1 1249 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 ALOXE3Q9BYJ1 711 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 IL1RL2Q9HB29 575 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 CTNNAL1Q9UBT7 734 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 VTI1BQ9UEU0 232 aa21.83■■□□□ 1.09
CPSF1-202ENST00000527827 A0A0G2JNJ9 132 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 SYNDIG1LA6NDD5 238 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 IST1P53990 364 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 MTTPP55157 894 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 DLX5P56178 289 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 FOXO1Q12778 655 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 FRG1Q14331 258 aaKnown RBP21.82■■□□□ 1.08
CPSF1-202ENST00000527827 TRIM40Q6P9F5 258 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 B3GNT6Q6ZMB0 384 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 FRA10AC1Q70Z53 315 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 ADAMTSL2Q86TH1 951 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 FAM109AQ8N4B1 249 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 GOLM1Q8NBJ4 401 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 OR14A16Q8NHC5 309 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 TMUB1Q9BVT8 246 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 OR8D2Q9GZM6 311 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 PITHD1Q9GZP4 211 aaPredicted RBP21.82■■□□□ 1.08
CPSF1-202ENST00000527827 SLC24A3Q9HC58 644 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 Q9UFV3 132 aa21.82■■□□□ 1.08
CPSF1-202ENST00000527827 ZNF490Q9ULM2 529 aaPredicted RBP21.82■■□□□ 1.08
CPSF1-202ENST00000527827 ANKDD1BA6NHY2 528 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 FIGNL2A6NMB9 653 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 CELA3AP09093 270 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 ZFP36L2P47974 494 aaKnown RBP21.81■■□□□ 1.08
CPSF1-202ENST00000527827 DNASE1L1P49184 302 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 RNF4P78317 190 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 HYAL4Q2M3T9 481 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 LIX1LQ8IVB5 337 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 OR8K3Q8NH51 312 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 CAPZA3Q96KX2 299 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 TMEM79Q9BSE2 394 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 PRDM7Q9NQW5 492 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 GPRC5BQ9NZH0 403 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 L3MBTL1Q9Y468 752 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 ARHGAP21Q5T5U3 1957 aa21.81■■□□□ 1.08
CPSF1-202ENST00000527827 MAP1AP78559 2803 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 NCF1BA6NI72 391 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 NCF1CA8MVU1 366 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 AQP7O14520 342 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 TAPBPO15533 448 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 ZWINTO95229 277 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 NCF1P14598 390 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 ADH7P40394 386 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 MGAT5Q09328 741 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 MORF4L2Q15014 288 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 EFTUD2Q15029 972 aaKnown RBP eCLIP21.8■■□□□ 1.086e-12■■■■■ 29.9
CPSF1-202ENST00000527827 TGFBIQ15582 683 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 FAM47EQ6ZV65 393 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 SLC35F6Q8N357 371 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 SLC2A12Q8TD20 617 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 LRRC39Q96DD0 335 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 SGCZQ96LD1 299 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 F2RL3Q96RI0 385 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 CAPS2Q9BXY5 557 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 EHD1Q9H4M9 534 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 COPS7BQ9H9Q2 264 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 SEMA4BQ9NPR2 832 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 SACM1LQ9NTJ5 587 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 TUBA8Q9NY65 449 aaPredicted RBP21.8■■□□□ 1.08
CPSF1-202ENST00000527827 NCKAP5O14513 1909 aa21.8■■□□□ 1.08
CPSF1-202ENST00000527827 ZNF469Q96JG9 3925 aaPredicted RBP21.79■■□□□ 1.08
CPSF1-202ENST00000527827 NAV3Q8IVL0 2385 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 ATP6AP2A0A1C7CYW4 349 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 C17orf105B2RV13 164 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 SUSD5O60279 629 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 LDB3O75112 727 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 ATP6AP2O75787 350 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 CCL3P10147 92 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 HPDP32754 393 aaPredicted RBP21.79■■□□□ 1.08
CPSF1-202ENST00000527827 STX4Q12846 297 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 RCN2Q14257 317 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 FBXO48Q5FWF7 155 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 ZNF793Q6ZN11 406 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 UBE3DQ7Z6J8 389 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 MCMBPQ9BTE3 642 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 CXXC4Q9H2H0 198 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 DNAJC11Q9NVH1 559 aa21.79■■□□□ 1.08
CPSF1-202ENST00000527827 WISP3O95389 354 aaPredicted RBP21.78■■□□□ 1.08
CPSF1-202ENST00000527827 NADKO95544 446 aaPredicted RBP21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ETHE1O95571 254 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 CD99P14209 185 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 TNNI3P19429 210 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 CD22P20273 847 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 GGT5P36269 586 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 MAN2A2P49641 1150 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 DOC2AQ14183 400 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 OPN5Q6U736 354 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ANKMY2Q8IV38 441 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 OR5L2Q8NGL0 311 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms