RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AIF1LQ9BQI0 150 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 PSD2Q9BQI7 771 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 COPS4Q9BT78 406 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 NLNQ9BYT8 704 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 C5AR2Q9P296 337 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 B3GNT3Q9Y2A9 372 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 ENPP4Q9Y6X5 453 aa16.74■□□□□ 0.27
USH1C-205ENST00000527020 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 CKAP5Q14008 2032 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 H7BY64 318 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 IFNA14P01570 189 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 CBLP22681 906 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 TGFBR1P36897 503 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 RPS26P11Q5JNZ5 115 aaPredicted RBP16.73■□□□□ 0.27
USH1C-205ENST00000527020 AGBL4Q5VU57 503 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 EGFLAMQ63HQ2 1017 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 REEP3Q6NUK4 255 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 LINC01555Q8NAE3 123 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 GGHQ92820 318 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 PRAP1Q96NZ9 151 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 AMBNQ9NP70 447 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 MBNL1Q9NR56 388 aaKnown RBP16.73■□□□□ 0.27
USH1C-205ENST00000527020 SIRT3Q9NTG7 399 aaPredicted RBP16.73■□□□□ 0.27
USH1C-205ENST00000527020 SLC6A14Q9UN76 642 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 ERGIC3Q9Y282 383 aa16.73■□□□□ 0.27
USH1C-205ENST00000527020 CAPN5O15484 640 aaPredicted RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 TMPRSS11DO60235 418 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 CCR8P51685 355 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 PCBP4P57723 403 aaKnown RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 GANABQ14697 944 aaKnown RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 MAPK11Q15759 364 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 TBC1D25Q3MII6 688 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 CENPSQ8N2Z9 138 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 CHPT1Q8WUD6 406 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 SLC38A5Q8WUX1 472 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 OR5P2Q8WZ92 322 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 WDR37Q9Y2I8 494 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 SNX11Q9Y5W9 270 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 SNRNP200O75643 2136 aaKnown RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 CLDN25C9JDP6 229 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 M0R082 166 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 M0R3G1 203 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 FFAR1O14842 300 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 MID1O15344 667 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 FUCA1P04066 466 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 POU2F1P14859 743 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 CD36P16671 472 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 LIPAP38571 399 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 FRKP42685 505 aaPredicted RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 IDH2P48735 452 aaKnown RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 ALDH9A1P49189 494 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 TANGO2Q6ICL3 276 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 TNFAIP8L2Q6P589 184 aaPredicted RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 SLC30A8Q8IWU4 369 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 AMER3Q8N944 861 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 SNRNP27Q8WVK2 155 aaKnown RBP16.72■□□□□ 0.27
USH1C-205ENST00000527020 SMPDL3AQ92484 453 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 UCN3Q969E3 161 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 TEX101Q9BY14 249 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 A4GALTQ9NPC4 353 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 SPATA7Q9P0W8 599 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 RHCGQ9UBD6 479 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 SERGEFQ9UGK8 458 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 KCND3Q9UK17 655 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 HCN4Q9Y3Q4 1203 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 DOCK8Q8NF50 2099 aa16.72■□□□□ 0.27
USH1C-205ENST00000527020 CLCA1A8K7I4 914 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 M0R129 80 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 PDPK1O15530 556 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 LCMT2O60294 686 aaKnown RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 GADD45GO95257 159 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 NADKO95544 446 aaPredicted RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 CDK1P06493 297 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 RHCEP18577 417 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 GJA4P35212 333 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 HSD17B2P37059 387 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 CLCNKAP51800 687 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 NUDT6P53370 316 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 MANFP55145 182 aaKnown RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 LIM2P55344 173 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 TMEM236Q5W0B7 351 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 ZNF770Q6IQ21 691 aaPredicted RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 VITQ6UXI7 678 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 GET4Q7L5D6 327 aaPredicted RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 GPR32P1Q8NGA4 272 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 AICDAQ9GZX7 198 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 PRKAG2Q9UGJ0 569 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 WBP11Q9Y2W2 641 aaKnown RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 OR1A2Q9Y585 309 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 DNMT3AQ9Y6K1 912 aaPredicted RBP16.71■□□□□ 0.27
USH1C-205ENST00000527020 CLDN24A6NM45 220 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 SEMA7AO75326 666 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 RPN2P04844 631 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 BCHEP06276 602 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 CXCR2P25025 360 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 PSMD7P51665 324 aa16.71■□□□□ 0.27
USH1C-205ENST00000527020 RAB15P59190 212 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms