RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 C3orf30Q96M34 536 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 KCNC2Q96PR1 638 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 TBCDQ9BTW9 1192 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 NDC1Q9BTX1 674 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 ROGDIQ9GZN7 287 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 NSRP1Q9H0G5 558 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 CHST8Q9H2A9 424 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 KLHL31Q9H511 634 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 AKIRIN1Q9H9L7 192 aaPredicted RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 CUTCQ9NTM9 273 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 SIRT5Q9NXA8 310 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 A6NL46 340 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 PLPP1O14494 284 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 LSM1O15116 133 aaKnown RBP16.3■□□□□ 0.2
CCS-204ENST00000526066 ZNF749O43361 778 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 ERI3O43414 337 aaKnown RBP16.3■□□□□ 0.2
CCS-204ENST00000526066 RAB40ALP0C0E4 278 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 PRR35P0CG20 571 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 RAP1GDS1P52306 607 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 SKP1P63208 163 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 NR6A1Q15406 480 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 SMU1Q2TAY7 513 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 PRR30Q53SZ7 412 aaPredicted RBP16.3■□□□□ 0.2
CCS-204ENST00000526066 SPIN4Q56A73 249 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 SLC6A19Q695T7 634 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 CGB2Q6NT52 195 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 RHBDD2Q6NTF9 364 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 EPGNQ6UW88 154 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 RAB43Q86YS6 212 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 FDCSPQ8NFU4 85 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 ZCCHC10Q8TBK6 192 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 CHTF18Q8WVB6 975 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 C11orf24Q96F05 449 aaPredicted RBP16.3■□□□□ 0.2
CCS-204ENST00000526066 LRFN5Q96NI6 719 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 LRTM1Q9HBL6 345 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 C1orf109Q9NX04 203 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 ADAM29Q9UKF5 820 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 TCFL5Q9UL49 500 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 PADI2Q9Y2J8 665 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 CENPEQ02224 2701 aa16.3■□□□□ 0.2
CCS-204ENST00000526066 A0A088AWK7 358 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 C9J4A7 227 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 MEN1O00255 615 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 KLHL41O60662 606 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 SH3BGRLO75368 114 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 CEACAM4O75871 244 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 SCELO95171 688 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 ALPPP05187 535 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 ZNF888P0CJ79 500 aaPredicted RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 ZNF10P21506 573 aaPredicted RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 DRD4P21917 467 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 PLA2G16P53816 162 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 AQP5P55064 265 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 SPDYAQ5MJ70 313 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 OR4C11Q6IEV9 310 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 GALNT18Q6P9A2 607 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 LARP4Q71RC2 724 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCS-204ENST00000526066 PAGE2Q7Z2X7 111 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 ACTRT2Q8TDY3 377 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 TUBGCP3Q96CW5 907 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 FCRL1Q96LA6 429 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 C5orf34Q96MH7 638 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 QRFPRQ96P65 431 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 ZNF717Q9BY31 904 aaPredicted RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 MRPL1Q9BYD6 325 aaKnown RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 DDX31Q9H8H2 851 aaKnown RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 ACTR5Q9H9F9 607 aaPredicted RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 CLK4Q9HAZ1 481 aaKnown RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 ANKHQ9HCJ1 492 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 PRDM7Q9NQW5 492 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 KLHL14Q9P2G3 628 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 MRPS2Q9Y399 296 aaKnown RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 TMED5Q9Y3A6 229 aa16.29■□□□□ 0.2
CCS-204ENST00000526066 TEP1Q99973 2627 aaKnown RBP16.29■□□□□ 0.2
CCS-204ENST00000526066 MED13Q9UHV7 2174 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 PRRC2CQ9Y520 2896 aaKnown RBP16.28■□□□□ 0.2
CCS-204ENST00000526066 A0A1B0GX78 115 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 ATP6AP2A0A1C7CYW4 349 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 C4orf51C9J302 202 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 SAP18O00422 153 aaKnown RBP16.28■□□□□ 0.2
CCS-204ENST00000526066 DSCR3O14972 297 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 GALR3O60755 368 aaPredicted RBP16.28■□□□□ 0.2
CCS-204ENST00000526066 DIAPH2O60879 1101 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 ATP6AP2O75787 350 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 MED26O95402 600 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 NSA2O95478 260 aaKnown RBP16.28■□□□□ 0.2
CCS-204ENST00000526066 RNF224P0DH78 156 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 ACPPP15309 386 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 BSGP35613 385 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 IDH3AP50213 366 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 RAB8AP61006 207 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 ACSM2AQ08AH3 577 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 KIAA0040Q15053 153 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 AP5B1Q2VPB7 878 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 SLC9B1Q4ZJI4 515 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 ATP6AP1LQ52LC2 224 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 C6orf136Q5SQH8 315 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 VWA5B1Q5TIE3 1220 aa16.28■□□□□ 0.2
CCS-204ENST00000526066 PRAMEF17Q5VTA0 474 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms