RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRR35P0CG20 571 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 NDUFS1P28331 727 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 EEF1DP29692 281 aaKnown RBP6.44□□□□□ -1.38
NEDD8-203ENST00000524927 STAT6P42226 847 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 PIK3CAP42336 1068 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 RGS7P49802 495 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 CYP2J2P51589 502 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 SLC37A1P57057 533 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 GPR18Q14330 331 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 ACKR1Q16570 336 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 RUNDC3AQ59EK9 446 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 RAET1GQ6H3X3 334 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 LRRC31Q6UY01 552 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF683Q8IZ20 524 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 FAM98AQ8NCA5 519 aaKnown RBP6.44□□□□□ -1.38
NEDD8-203ENST00000524927 DNAJC19Q96DA6 116 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 GPR78Q96P69 363 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 SH3GL2Q99962 352 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 NCAPGQ9BPX3 1015 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 DUSP26Q9BV47 211 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 TRIM2Q9C040 744 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 CATSPERBQ9H7T0 1116 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 WDR54Q9H977 334 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 ASNSD1Q9NWL6 643 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 IRAK4Q9NWZ3 460 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 B4GALT7Q9UBV7 327 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 AP1M2Q9Y6Q5 423 aa6.44□□□□□ -1.38
NEDD8-203ENST00000524927 CPAMD8Q8IZJ3 1885 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 IGLV3-10A0A075B6K4 115 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 PIGNO95427 931 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 HLA-DRAP01903 254 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 UQCRHP07919 91 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ATP1A3P13637 1013 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF24P17028 368 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 PTGER1P34995 402 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 HOXD13P35453 343 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 NR1H2P55055 460 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 MPP1Q00013 466 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 DPTQ07507 201 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ALKBH1Q13686 389 aaKnown RBP6.43□□□□□ -1.38
NEDD8-203ENST00000524927 THOC5Q13769 683 aaKnown RBP6.43□□□□□ -1.38
NEDD8-203ENST00000524927 VEZF1Q14119 521 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 LARS2Q15031 903 aaKnown RBP6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ETFDHQ16134 617 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 RBBP7Q16576 425 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 CLEC12BQ2HXU8 276 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 NKAIN1Q4KMZ8 207 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 GPRC6AQ5T6X5 926 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 RHBDD2Q6NTF9 364 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 Q6ZPA2 131 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 AMIGO2Q86SJ2 522 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 TTC30BQ8N4P2 665 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 TMEM178AQ8NBL3 297 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 PCYOX1LQ8NBM8 494 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 SNX21Q969T3 373 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 DTD2Q96FN9 168 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 SCMH1Q96GD3 660 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 TTYH2Q9BSA4 534 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ABHD14AQ9BUJ0 271 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 MIS12Q9H081 205 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 POPDC2Q9HBU9 364 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF160Q9HCG1 818 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 CISHQ9NSE2 258 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF701Q9NV72 531 aaPredicted RBP6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ARL8BQ9NVJ2 186 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 THAP1Q9NVV9 213 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 ASB6Q9NWX5 421 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 GAR1Q9NY12 217 aaKnown RBP6.43□□□□□ -1.38
NEDD8-203ENST00000524927 MPP6Q9NZW5 540 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 VPS18Q9P253 973 aa6.43□□□□□ -1.38
NEDD8-203ENST00000524927 TMEM89A2RUT3 159 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 PRYO14603 147 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 RASGRF2O14827 1237 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 INSIG1O15503 277 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 RAMP2O60895 175 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 TMCC2O75069 709 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 TMCC1O94876 653 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 ITGA2P17301 1181 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 KRT4P19013 534 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 GPD1P21695 349 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 GPR1P46091 355 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 ASCL1P50553 236 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 ARSEP51690 589 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 RHOAP61586 193 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 POLR2LP62875 67 aaKnown RBP6.42□□□□□ -1.38
NEDD8-203ENST00000524927 YWHAZP63104 245 aaKnown RBP6.42□□□□□ -1.38
NEDD8-203ENST00000524927 PITX1P78337 314 aaPredicted RBP6.42□□□□□ -1.38
NEDD8-203ENST00000524927 SORDQ00796 357 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 GLE1Q53GS7 698 aaKnown RBP6.42□□□□□ -1.38
NEDD8-203ENST00000524927 LIPMQ5VYY2 423 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 DENND1BQ6P3S1 775 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 LCLAT1Q6UWP7 414 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 OTOAQ7RTW8 1153 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 MDS2Q8NDY4 140 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 RASSF8Q8NHQ8 419 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 GPT2Q8TD30 523 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 ST8SIA4Q92187 359 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 TIMP4Q99727 224 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 NPAS1Q99742 590 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 PAIP1Q9H074 479 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms