RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PLRG1O43660 514 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 AVILO75366 819 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 RNASEH2AO75792 299 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PGLSO95336 258 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 APBB3O95704 486 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 POP4O95707 220 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SOD1P00441 154 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 AGTP01019 485 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 IFNB1P01574 187 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 IL1BP01584 269 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 IGLV3-19P01714 112 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TRBC1P01850 177 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KRT14P02533 472 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 IGHV4-34P06331 123 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PIRTP0C851 137 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SP9P0CG40 484 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PRSS56P0CW18 603 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ADRB3P13945 408 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 AMD1P17707 334 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CTPS1P17812 591 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 MYF6P23409 242 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 FMO4P31512 558 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 HNF1BP35680 557 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SERPINF1P36955 418 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 MAGEA9P43362 315 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 RPL21P46778 160 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CXCL12P48061 93 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 FNTAP49354 379 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CCR3P51677 355 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 GEMIN4P57678 1058 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ST8SIA6P61647 398 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 AP1S1P61966 158 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CSTF1Q05048 431 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 BCL2L1Q07817 233 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 DLG1Q12959 904 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PTK6Q13882 451 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 RBM39Q14498 530 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ELAVL3Q14576 367 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KCNJ11Q14654 390 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SLC1A5Q15758 541 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 UGP2Q16851 508 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PARP6Q2NL67 630 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF805Q5CZA5 627 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SIRPB2Q5JXA9 342 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TPRG1LQ5T0D9 272 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SEL1L3Q68CR1 1132 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF776Q68DI1 518 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KCTD16Q68DU8 428 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TYW3Q6IPR3 259 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 LIN54Q6MZP7 749 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PGBD2Q6P3X8 592 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KLHL24Q6TFL4 600 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 BZW1Q7L1Q6 419 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF771Q7L3S4 317 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TRMT11Q7Z4G4 463 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC49Q8IUZ0 686 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 DCUN1D3Q8IWE4 304 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 GALNT15Q8N3T1 639 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 RYBPQ8N488 228 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 HDDC3Q8N4P3 179 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 DEFB119Q8N690 84 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 NAT8LQ8N9F0 302 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 LMNTD1Q8N9Z9 388 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ZBTB44Q8NCP5 570 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TSTD1Q8NFU3 115 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 OR4N2Q8NGD1 307 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 OR52K1Q8NGK4 314 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 OR13C4Q8NGS5 318 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PDCD6IPQ8WUM4 868 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 UBE2Q2Q8WVN8 375 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PRCCQ92733 491 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KLK6Q92876 244 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SLCO2A1Q92959 643 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 C3orf49Q96BT1 292 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SIPA1Q96FS4 1042 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC114Q96M63 670 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 GDAP1L1Q96MZ0 367 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF385AQ96PM9 386 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 MCCC1Q96RQ3 725 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 TBL1YQ9BQ87 522 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 APOL2Q9BQE5 337 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC1Q9BTT6 524 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 FICDQ9BVA6 458 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PCDH9Q9HC56 1237 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SDF2L1Q9HCN8 221 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ITM2CQ9NQX7 267 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 THAP1Q9NVV9 213 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 FBXL12Q9NXK8 326 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 KLHL8Q9P2G9 620 aaPredicted RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 SUN2Q9UH99 717 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 RSPH14Q9UHP6 348 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CD84Q9UIB8 345 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 CA5BQ9Y2D0 317 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 PPIL1Q9Y3C6 166 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 FADS3Q9Y5Q0 445 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 R4GN57 208 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ATXN2Q99700 1313 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 MDC1Q14676 2089 aaKnown RBP2.86□□□□□ -1.95
CSDE1-208ENST00000524652 HEATR5BQ9P2D3 2071 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 POLQO75417 2590 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms