RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HCN1O60741 890 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 TRAPPC6AO75865 159 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HAUS5O94927 633 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HRGP04196 525 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HIST1H2AGP0C0S8 130 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HIST1H2ADP20671 130 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 GDF1P27539 372 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 SCTRP47872 440 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 CPA2P48052 419 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 PGGT1BP53609 377 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 ADARP55265 1226 aaKnown RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 FOXO1Q12778 655 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 TBX2Q13207 712 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 TOMM20Q15388 145 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 ACSF3Q4G176 576 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 SEL1L2Q5TEA6 688 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 KIAA0930Q6ICG6 404 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 CCDC170Q8IYT3 715 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 MYO1HQ8N1T3 1032 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 TMEM132CQ8N3T6 1108 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 FBXW8Q8N3Y1 598 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 FAM13CQ8NE31 585 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 KCNJ9Q92806 393 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 NEIL2Q969S2 332 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HIST1H2AHQ96KK5 128 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 OR4K3Q96R72 315 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HIST1H2AJQ99878 128 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 HAUS8Q9BT25 410 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 H2AFJQ9BTM1 129 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 BDH2Q9BUT1 245 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 SGPP1Q9BX95 441 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 AICDAQ9GZX7 198 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 PARVBQ9HBI1 364 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 ADAP2Q9NPF8 381 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 C6orf203Q9P0P8 240 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 REXO2Q9Y3B8 237 aaKnown RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 DYRK1BQ9Y463 629 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 MMACHCQ9Y4U1 282 aa10.72□□□□□ -0.69
SDCBP-211ENST00000523441 EPN1Q9Y6I3 576 aaPredicted RBP10.72□□□□□ -0.69
SDCBP-211ENST00000523441 C17orf105B2RV13 164 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 CES2O00748 559 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 CASKO14936 926 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 CCND1P24385 295 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 SLC1A2P43004 574 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 RNF4P78317 190 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 STX4Q12846 297 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 DUSP8Q13202 625 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 SIX1Q15475 284 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 NIPAL1Q6NVV3 410 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 OPN5Q6U736 354 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 PLXDC2Q6UX71 529 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 MAATS1Q7Z4T9 603 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 HEATR5AQ86XA9 2040 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 SCUBE1Q8IWY4 988 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 NEIL3Q8TAT5 605 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 SLC5A11Q8WWX8 675 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 LINGO1Q96FE5 620 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 DOCK7Q96N67 2140 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 CSF3RQ99062 836 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 RBM24Q9BX46 236 aaKnown RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF703Q9H7S9 590 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 C20orf96Q9NUD7 363 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 FOXD3Q9UJU5 478 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 EIF3LQ9Y262 564 aaKnown RBP10.71□□□□□ -0.69
SDCBP-211ENST00000523441 SLC6A5Q9Y345 797 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 COMMD10Q9Y6G5 202 aa10.71□□□□□ -0.69
SDCBP-211ENST00000523441 SH3D21A4FU49 640 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 MIF4GDA9UHW6 222 aaKnown RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 GOLGA8MH3BSY2 632 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 ERI3O43414 337 aaKnown RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 B3GALT2O43825 422 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 LDB3O75112 727 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 EPPINO95925 133 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 C8GP07360 202 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 CERS1P27544 350 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 CEACAM8P31997 349 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 CPOXP36551 454 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 KCNJ1P48048 391 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 RGS4P49798 205 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 PLA2G16P53816 162 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 NR1H2P55055 460 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 TERF2Q15554 542 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 ELAVL1Q15717 326 aaKnown RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 SLC22A10Q63ZE4 541 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 HMBOX1Q6NT76 420 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 POMZP3Q6PJE2 187 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 PAQR3Q6TCH7 311 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 LACC1Q8IV20 430 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 PHC2Q8IXK0 858 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 GOLM1Q8NBJ4 401 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 MAPK1IP1LQ8NDC0 245 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 TRPV3Q8NET8 790 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 ABHD11Q8NFV4 315 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 OR4K1Q8NGD4 311 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 SLC2A12Q8TD20 617 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 PTPMT1Q8WUK0 201 aaPredicted RBP10.7□□□□□ -0.7
SDCBP-211ENST00000523441 HSPBAP1Q96EW2 488 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 CCL19Q99731 98 aa10.7□□□□□ -0.7
SDCBP-211ENST00000523441 AIF1LQ9BQI0 150 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms