RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	FAM107A	O95990	144 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ANXA4	P09525	319 aa	Predicted RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	FAM58BP	P0C7Q3	252 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	BCKDHA	P12694	445 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ACPP	P15309	386 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	SDC1	P18827	310 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	TACR1	P25103	407 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	DIO3	P55073	304 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	HNRNPH2	P55795	449 aa	Known RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ERV3-1	Q14264	604 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	SYT16	Q17RD7	645 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	FAM69B	Q5VUD6	431 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	NIPAL1	Q6NVV3	410 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	CYP20A1	Q6UW02	462 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	COX15	Q7KZN9	410 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	CA13	Q8N1Q1	262 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	LIX1	Q8N485	282 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	C16orf78	Q8WTQ4	265 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	TM4SF18	Q96CE8	201 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	SLC45A3	Q96JT2	553 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	MARK4	Q96L34	752 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	MAPKAP1	Q9BPZ7	522 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	NPL	Q9BXD5	320 aa	Predicted RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ACTL8	Q9H568	366 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	SLC22A11	Q9NSA0	550 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	AIG1	Q9NVV5	245 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ASIC5	Q9NY37	505 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	NOP53	Q9NZM5	478 aa	Known RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	KCMF1	Q9P0J7	381 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	HCN3	Q9P1Z3	774 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	GPN3	Q9UHW5	284 aa	Predicted RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	KCND3	Q9UK17	655 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	G3BP2	Q9UN86	482 aa	Known RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	CDC14A	Q9UNH5	594 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	EIF3L	Q9Y262	564 aa	Known RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	FARSA	Q9Y285	508 aa	Known RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ASB4	Q9Y574	426 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	DSP	P15924	2871 aa	Known RBP	11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	FAM208B	Q5VWN6	2430 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	ZFYVE26	Q68DK2	2539 aa		11.26	□□□□□ -0.61
PVT1-215	ENST00000522963	UBD	O15205	165 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	ONECUT2	O95948	504 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	G6PD	P11413	515 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	PRPS2	P11908	318 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	FBL	P22087	321 aa	Known RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	MAPK1	P28482	360 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	MAPK12	P53778	367 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	LIM2	P55344	173 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	RAB38	P57729	211 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	SKP1	P63208	163 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	DCD	P81605	110 aa	Known RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	CBX1	P83916	185 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	MC1R	Q01726	317 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	ZNF763	Q0D2J5	394 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	MAD2L1	Q13257	205 aa	Predicted RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	DSG2	Q14126	1118 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	DEFB109B	Q30KR1	87 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	NKAIN1	Q4KMZ8	207 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	MMP21	Q8N119	569 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	ENDOV	Q8N8Q3	282 aa	Known RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	CLHC1	Q8NHS4	586 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	EXTL1	Q92935	676 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	COL26A1	Q96A83	441 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	EGLN2	Q96KS0	407 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	LRFN5	Q96NI6	719 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	CATSPER2	Q96P56	530 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	ARHGAP9	Q9BRR9	750 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	CLK4	Q9HAZ1	481 aa	Known RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	ZNF304	Q9HCX3	659 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	LYRM4	Q9HD34	91 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	LYAR	Q9NX58	379 aa	Known RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	IFT80	Q9P2H3	777 aa	Predicted RBP	11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	BAIAP2L1	Q9UHR4	511 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	FBXW2	Q9UKT8	454 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	DAPP1	Q9UN19	280 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963	ATG4B	Q9Y4P1	393 aa		11.25	□□□□□ -0.61
PVT1-215	ENST00000522963		A0A1W2PR48	441 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	C21orf140	B9A014	251 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	FAM227A	F5H4B4	570 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	CREG1	O75629	220 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	IL3	P08700	152 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	PTPN4	P29074	926 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	TAS2R50	P59544	299 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	TRA2B	P62995	288 aa	Known RBP	11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	RHD	Q02161	417 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	CDC20	Q12834	499 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	PTGR1	Q14914	329 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	C18orf63	Q68DL7	685 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	FAM71E1	Q6IPT2	247 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	FAM198B	Q6UWH4	519 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	CLNK	Q7Z7G1	428 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	GPR180	Q86V85	440 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	PARP9	Q8IXQ6	854 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	EFCAB3	Q8N7B9	438 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	OR51Q1	Q8NH59	317 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	CDC26	Q8NHZ8	85 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	BCAS4	Q8TDM0	211 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	UCN3	Q969E3	161 aa		11.24	□□□□□ -0.61
PVT1-215	ENST00000522963	PEX11G	Q96HA9	241 aa		11.24	□□□□□ -0.61

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