RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TMEM178AQ8NBL3 297 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 SRFBP1Q8NEF9 429 aaKnown RBP17.42■□□□□ 0.38
SPIDR-220ENST00000522900 PTPMT1Q8WUK0 201 aaPredicted RBP17.42■□□□□ 0.38
SPIDR-220ENST00000522900 DCAKDQ8WVC6 231 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 RELTQ969Z4 430 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ISL2Q96A47 359 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ANKRD9Q96BM1 317 aaPredicted RBP17.42■□□□□ 0.38
SPIDR-220ENST00000522900 CMTM7Q96FZ5 175 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 VMP1Q96GC9 406 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 FRMD6Q96NE9 622 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ROGDIQ9GZN7 287 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 IPPKQ9H8X2 491 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ACTR8Q9H981 624 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ADAP2Q9NPF8 381 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 RNF11Q9Y3C5 154 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 NME2P1O60361 137 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 NME2P22392 152 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 SERPINB1P30740 379 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 SSR2P43308 183 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 HLCSP50747 726 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 RPS13P62277 151 aaKnown RBP17.41■□□□□ 0.38
SPIDR-220ENST00000522900 ALDH6A1Q02252 535 aaKnown RBP17.41■□□□□ 0.38
SPIDR-220ENST00000522900 SLAMF1Q13291 335 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 GTF2H2Q13888 395 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 ELAVL1Q15717 326 aaKnown RBP17.41■□□□□ 0.38
SPIDR-220ENST00000522900 ZNF787Q6DD87 383 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 GTF2H2CQ6P1K8 395 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 PHF21BQ96EK2 531 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 DMRT3Q9NQL9 472 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 VTI1BQ9UEU0 232 aa17.41■□□□□ 0.38
SPIDR-220ENST00000522900 TRGV8A0A0C4DH27 118 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 A0A1B0GUH1 482 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 NPIPA5E9PKD4 350 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 PLPP1O14494 284 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 FCHO1O14526 889 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 OR7A17O14581 309 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 ZNHIT1O43257 154 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 ITGA10O75578 1167 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 ZFAND5O76080 213 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 SCELO95171 688 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 CPN2P22792 545 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 PIK3CBP42338 1070 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 PIK3CGP48736 1102 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 NEK2P51955 445 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 STX4Q12846 297 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 RCN2Q14257 317 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 ZRSR2Q15696 482 aaKnown RBP17.4■□□□□ 0.38
SPIDR-220ENST00000522900 CPSF6Q16630 551 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPIDR-220ENST00000522900 OR4N5Q8IXE1 308 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 TMEM132CQ8N3T6 1108 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 CPSF7Q8N684 471 aaKnown RBP17.4■□□□□ 0.38
SPIDR-220ENST00000522900 PTGR2Q8N8N7 351 aaPredicted RBP17.4■□□□□ 0.38
SPIDR-220ENST00000522900 RGMAQ96B86 450 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 CDK15Q96Q40 435 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 ADGRE2Q9UHX3 823 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 NFU1Q9UMS0 254 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 NPIPA1Q9UND3 350 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 PCDHGA11Q9Y5H2 935 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 TNPO3Q9Y5L0 923 aaKnown RBP17.4■□□□□ 0.38
SPIDR-220ENST00000522900 CLCA3PQ9Y6N3 262 aa17.4■□□□□ 0.38
SPIDR-220ENST00000522900 WASHC1A8K0Z3 465 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 TRIM49D1C9J1S8 452 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 H0YIV9 168 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 CDK2AP1O14519 115 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 FGF17O60258 216 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 PRKRAO75569 313 aaKnown RBP17.39■□□□□ 0.37
SPIDR-220ENST00000522900 ETHE1O95571 254 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 RBP1P09455 135 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 TNNI3P19429 210 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 SERPINB9P50453 376 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 PER3P56645 1201 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 C18orf63Q68DL7 685 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 MDGA2Q7Z553 956 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 SIAH3Q8IW03 269 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 L3MBTL4Q8NA19 623 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 WDR20Q8TBZ3 569 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 MTFMTQ96DP5 389 aaKnown RBP17.39■□□□□ 0.37
SPIDR-220ENST00000522900 SCYL1Q96KG9 808 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 GPR137Q96N19 417 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 NSUN5Q96P11 429 aaKnown RBP17.39■□□□□ 0.37
SPIDR-220ENST00000522900 ZNF717Q9BY31 904 aaPredicted RBP17.39■□□□□ 0.37
SPIDR-220ENST00000522900 NOL11Q9H8H0 719 aaKnown RBP17.39■□□□□ 0.37
SPIDR-220ENST00000522900 XPR1Q9UBH6 696 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 SH3BGRL2Q9UJC5 107 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 TSC22D4Q9Y3Q8 395 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 ATG4BQ9Y4P1 393 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 DOPEY1Q5JWR5 2465 aa17.39■□□□□ 0.37
SPIDR-220ENST00000522900 CROCCQ5TZA2 2017 aa17.38■□□□□ 0.37
SPIDR-220ENST00000522900 A0A087WUV0 522 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-220ENST00000522900 EEDO75530 441 aaKnown RBP17.38■□□□□ 0.37
SPIDR-220ENST00000522900 OR2J2O76002 312 aa17.38■□□□□ 0.37
SPIDR-220ENST00000522900 TUBB4AP04350 444 aa17.38■□□□□ 0.37
SPIDR-220ENST00000522900 PTX3P26022 381 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-220ENST00000522900 GCAP28676 217 aa17.38■□□□□ 0.37
SPIDR-220ENST00000522900 RAP1GDS1P52306 607 aa17.38■□□□□ 0.37
SPIDR-220ENST00000522900 HNRNPH2P55795 449 aaKnown RBP17.38■□□□□ 0.37
SPIDR-220ENST00000522900 SERTAD2Q14140 314 aa17.38■□□□□ 0.37
SPIDR-220ENST00000522900 DGAT2L6Q6ZPD8 337 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms