RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 EPS8L2Q9H6S3 715 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 KCNK13Q9HB14 408 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 LYRM4Q9HD34 91 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 MMP25Q9NPA2 562 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 LGALS13Q9UHV8 139 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 ADGRE2Q9UHX3 823 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 RAB21Q9UL25 225 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 NBASA2RRP1 2371 aa16.71■□□□□ 0.26
CLK4-211ENST00000522556 A0A1W2PS29 197 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 FOXE1O00358 373 aaPredicted RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 COPEO14579 308 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 FGF17O60258 216 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 MYO1DO94832 1006 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 WDPCPO95876 746 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 MYL2P10916 166 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 CPN2P22792 545 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 UQCRFS1P47985 274 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 FOXA1P55317 472 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 HSD17B7P56937 341 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 SRSF11Q05519 484 aaKnown RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 ZNF33BQ06732 778 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 CUL3Q13618 768 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 MRM1Q6IN84 353 aaKnown RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 SRRM1Q8IYB3 904 aaKnown RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 BEST3Q8N1M1 668 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 MREGQ8N565 214 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 CCNYL1Q8N7R7 359 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 SRFBP1Q8NEF9 429 aaKnown RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 M1APQ8TC57 530 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 CPT1CQ8TCG5 803 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 DOK4Q8TEW6 326 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 ZNF382Q96SR6 550 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 ILKAPQ9H0C8 392 aaPredicted RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 SLAMF7Q9NQ25 335 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 TEX10Q9NXF1 929 aaPredicted RBP16.7■□□□□ 0.26
CLK4-211ENST00000522556 SLC17A7Q9P2U7 560 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 TRPS1Q9UHF7 1281 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 ASB4Q9Y574 426 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 PCDHGA10Q9Y5H3 936 aa16.7■□□□□ 0.26
CLK4-211ENST00000522556 A0A1W2PR48 441 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 GLOD5A6NK44 160 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 MANBAO00462 879 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 SPAG7O75391 227 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 UQCRHP07919 91 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 PTX3P26022 381 aaPredicted RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 PHEXP78562 749 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 TNFRSF17Q02223 184 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 IFFO1Q0D2I5 559 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 IFT88Q13099 833 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 PCLAFQ15004 111 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 INPP5JQ15735 1006 aaPredicted RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 EXT1Q16394 746 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 H3F3CQ6NXT2 135 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 SCIMPQ6UWF3 145 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 DGAT2L6Q6ZPD8 337 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 GPRIN3Q6ZVF9 776 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 HPS6Q86YV9 775 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 MMP21Q8N119 569 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 ZCCHC7Q8N3Z6 543 aaKnown RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 CISD2Q8N5K1 135 aaKnown RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 ZNF321PQ8N8H1 164 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 APCDD1LQ8NCL9 501 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 DNAJB14Q8TBM8 379 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 ELP5Q8TE02 316 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 ADAMTS18Q8TE60 1221 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 SELENOMQ8WWX9 145 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 TM9SF4Q92544 642 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 SNRNP40Q96DI7 357 aaKnown RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 APOPT1Q96IL0 206 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 LMF1Q96S06 567 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 SHCBP1LQ9BZQ2 653 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 ROGDIQ9GZN7 287 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 ELOVL6Q9H5J4 265 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
CLK4-211ENST00000522556 ANKRD10Q9NXR5 420 aa16.69■□□□□ 0.26
CLK4-211ENST00000522556 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
CLK4-211ENST00000522556 WISP1O95388 367 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 AIFM1O95831 613 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 ICAM2P13598 275 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 TPP2P29144 1249 aaPredicted RBP16.68■□□□□ 0.26
CLK4-211ENST00000522556 NAGLUP54802 743 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 ARG2P78540 354 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 ZNF844Q08AG5 666 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 GALNT1Q10472 559 aaPredicted RBP16.68■□□□□ 0.26
CLK4-211ENST00000522556 ACER2Q5QJU3 275 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 ZNF468Q5VIY5 522 aaPredicted RBP16.68■□□□□ 0.26
CLK4-211ENST00000522556 GPR180Q86V85 440 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 SLC22A9Q8IVM8 553 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 C10orf107Q8IVU9 208 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 BANPQ8N9N5 519 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 ARMC2Q8NEN0 867 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 AGAP11Q8TF27 550 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 SERPINI1Q99574 410 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 ASF1BQ9NVP2 202 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 GRID1Q9ULK0 1009 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 PPT2Q9UMR5 302 aa16.68■□□□□ 0.26
CLK4-211ENST00000522556 SLC12A4Q9UP95 1085 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms